RNA–Protein interactions for RNA: ENST00000591890.5

H3F3B-210, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-210ENST00000591890 NISCHQ9Y2I1 1504 aa26.84■■□□□ 1.89
H3F3B-210ENST00000591890 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
H3F3B-210ENST00000591890 ABCC9O60706 1549 aa23.63■■□□□ 1.37
H3F3B-210ENST00000591890 RB1CC1Q8TDY2 1594 aa22.62■■□□□ 1.21
H3F3B-210ENST00000591890 NACADO15069 1562 aa22.55■■□□□ 1.2
H3F3B-210ENST00000591890 MYO15BQ96JP2 1530 aa22.37■■□□□ 1.17
H3F3B-210ENST00000591890 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
H3F3B-210ENST00000591890 DCAF8L2P0C7V8 631 aa22.34■■□□□ 1.17
H3F3B-210ENST00000591890 DCAF1Q9Y4B6 1507 aa22.2■■□□□ 1.14
H3F3B-210ENST00000591890 UNC13AQ9UPW8 1703 aa22.18■■□□□ 1.14
H3F3B-210ENST00000591890 BICRAQ9NZM4 1560 aa22.04■■□□□ 1.12
H3F3B-210ENST00000591890 PABPN1Q86U42 306 aaKnown RBP eCLIP22.01■■□□□ 1.11
H3F3B-210ENST00000591890 DNAJC5BQ9UF47 199 aa21.92■■□□□ 1.1
H3F3B-210ENST00000591890 SCRIBQ14160 1630 aa21.85■■□□□ 1.09
H3F3B-210ENST00000591890 SHROOM4Q9ULL8 1493 aa21.71■■□□□ 1.07
H3F3B-210ENST00000591890 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
H3F3B-210ENST00000591890 CC2D2AQ9P2K1 1620 aa21.39■■□□□ 1.01
H3F3B-210ENST00000591890 CECR2Q9BXF3 1484 aa21.25■□□□□ 0.99
H3F3B-210ENST00000591890 SMARCA4P51532 1647 aa20.89■□□□□ 0.93
H3F3B-210ENST00000591890 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
H3F3B-210ENST00000591890 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
H3F3B-210ENST00000591890 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
H3F3B-210ENST00000591890 SMARCA2P51531 1590 aa20.74■□□□□ 0.91
H3F3B-210ENST00000591890 HMGXB3Q12766 1538 aa20.72■□□□□ 0.91
H3F3B-210ENST00000591890 MROH2BQ7Z745 1585 aa20.7■□□□□ 0.9
H3F3B-210ENST00000591890 PEG3Q9GZU2 1588 aa20.7■□□□□ 0.9
H3F3B-210ENST00000591890 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
H3F3B-210ENST00000591890 BAZ1BQ9UIG0 1483 aaKnown RBP20.59■□□□□ 0.89
H3F3B-210ENST00000591890 WIZO95785 1651 aa20.46■□□□□ 0.87
H3F3B-210ENST00000591890 NESP48681 1621 aa20.42■□□□□ 0.86
H3F3B-210ENST00000591890 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
H3F3B-210ENST00000591890 ERCC6Q03468 1493 aa20.33■□□□□ 0.85
H3F3B-210ENST00000591890 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
H3F3B-210ENST00000591890 CUX2O14529 1486 aa20.24■□□□□ 0.83
H3F3B-210ENST00000591890 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
H3F3B-210ENST00000591890 THOC2Q8NI27 1593 aaKnown RBP20.19■□□□□ 0.82
H3F3B-210ENST00000591890 KIF21AQ7Z4S6 1674 aa20.17■□□□□ 0.82
H3F3B-210ENST00000591890 CADPSQ9ULU8 1353 aa20.17■□□□□ 0.82
H3F3B-210ENST00000591890 PDS5BQ9NTI5 1447 aa20.11■□□□□ 0.81
H3F3B-210ENST00000591890 CFTRP13569 1480 aa20.05■□□□□ 0.8
H3F3B-210ENST00000591890 MRC2Q9UBG0 1479 aa19.98■□□□□ 0.79
H3F3B-210ENST00000591890 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
H3F3B-210ENST00000591890 FANCD2Q9BXW9 1451 aa19.96■□□□□ 0.79
H3F3B-210ENST00000591890 WDR62O43379 1518 aa19.96■□□□□ 0.79
H3F3B-210ENST00000591890 CEP164Q9UPV0 1460 aa19.95■□□□□ 0.78
H3F3B-210ENST00000591890 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
H3F3B-210ENST00000591890 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
H3F3B-210ENST00000591890 DNAJC5Q9H3Z4 198 aa19.83■□□□□ 0.77
H3F3B-210ENST00000591890 URB2Q14146 1524 aaKnown RBP19.82■□□□□ 0.76
H3F3B-210ENST00000591890 TOPBP1Q92547 1522 aa19.64■□□□□ 0.73
H3F3B-210ENST00000591890 DNMBPQ6XZF7 1577 aa19.59■□□□□ 0.73
H3F3B-210ENST00000591890 SUPT5HO00267 1087 aaKnown RBP19.57■□□□□ 0.72
H3F3B-210ENST00000591890 ABCC8Q09428 1581 aa19.55■□□□□ 0.72
H3F3B-210ENST00000591890 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
H3F3B-210ENST00000591890 ZNF608Q9ULD9 1512 aaPredicted RBP19.52■□□□□ 0.72
H3F3B-210ENST00000591890 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
H3F3B-210ENST00000591890 POLA1P09884 1462 aaPredicted RBP19.47■□□□□ 0.71
H3F3B-210ENST00000591890 EIF4G3O43432 1585 aaKnown RBP19.44■□□□□ 0.7
H3F3B-210ENST00000591890 CUX1P39880 1505 aa19.44■□□□□ 0.7
H3F3B-210ENST00000591890 FGD5Q6ZNL6 1462 aa19.37■□□□□ 0.69
H3F3B-210ENST00000591890 RAD54L2Q9Y4B4 1467 aa19.37■□□□□ 0.69
H3F3B-210ENST00000591890 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.692e-9■■■■□ 20.2
H3F3B-210ENST00000591890 SOGA1O94964 1423 aa19.32■□□□□ 0.68
H3F3B-210ENST00000591890 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
H3F3B-210ENST00000591890 OSCARQ8IYS5 282 aa19.27■□□□□ 0.68
H3F3B-210ENST00000591890 TDRD9Q8NDG6 1382 aaKnown RBP19.25■□□□□ 0.67
H3F3B-210ENST00000591890 CHD1O14646 1710 aa19.22■□□□□ 0.67
H3F3B-210ENST00000591890 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
H3F3B-210ENST00000591890 BIVM-ERCC5R4GMW8 1640 aa19.21■□□□□ 0.67
H3F3B-210ENST00000591890 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
H3F3B-210ENST00000591890 ABCA10Q8WWZ4 1543 aa19.18■□□□□ 0.66
H3F3B-210ENST00000591890 SNAPC4Q5SXM2 1469 aa19.17■□□□□ 0.66
H3F3B-210ENST00000591890 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.667e-8■□□□□ 11.3
H3F3B-210ENST00000591890 ABCA5Q8WWZ7 1642 aa19.16■□□□□ 0.66
H3F3B-210ENST00000591890 GRIN2BQ13224 1484 aa19.14■□□□□ 0.65
H3F3B-210ENST00000591890 PBRM1Q86U86 1689 aa19.13■□□□□ 0.65
H3F3B-210ENST00000591890 MAGI1Q96QZ7 1491 aaPredicted RBP19.12■□□□□ 0.65
H3F3B-210ENST00000591890 RIMBP3CA6NJZ7 1639 aa19.11■□□□□ 0.65
H3F3B-210ENST00000591890 RIMBP3BA6NNM3 1639 aa19.11■□□□□ 0.65
H3F3B-210ENST00000591890 RIMBP3Q9UFD9 1639 aa19.11■□□□□ 0.65
H3F3B-210ENST00000591890 GAPVD1Q14C86 1478 aa19.1■□□□□ 0.65
H3F3B-210ENST00000591890 ARHGEF11O15085 1522 aa19.07■□□□□ 0.64
H3F3B-210ENST00000591890 SYNJ2O15056 1496 aa19.05■□□□□ 0.64
H3F3B-210ENST00000591890 FBLN2P98095 1184 aa19.04■□□□□ 0.64
H3F3B-210ENST00000591890 TRIM41Q8WV44 630 aa19.04■□□□□ 0.64
H3F3B-210ENST00000591890 CLASP1Q7Z460 1538 aa19.04■□□□□ 0.64
H3F3B-210ENST00000591890 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
H3F3B-210ENST00000591890 CHMP7Q8WUX9 453 aaPredicted RBP18.97■□□□□ 0.63
H3F3B-210ENST00000591890 ERICH3Q5RHP9 1530 aa18.93■□□□□ 0.62
H3F3B-210ENST00000591890 ARAP1Q96P48 1450 aa18.92■□□□□ 0.62
H3F3B-210ENST00000591890 GRIN2AQ12879 1464 aa18.91■□□□□ 0.62
H3F3B-210ENST00000591890 FHAD1B1AJZ9 1412 aa18.88■□□□□ 0.61
H3F3B-210ENST00000591890 CEP170Q5SW79 1584 aa18.88■□□□□ 0.61
H3F3B-210ENST00000591890 NUP160Q12769 1436 aa18.86■□□□□ 0.61
H3F3B-210ENST00000591890 CYB5RLQ6IPT4 315 aa18.81■□□□□ 0.6
H3F3B-210ENST00000591890 ERCC6L2Q5T890 1561 aa18.77■□□□□ 0.6
H3F3B-210ENST00000591890 SHROOM2Q13796 1616 aa18.77■□□□□ 0.6
H3F3B-210ENST00000591890 KIF27Q86VH2 1401 aa18.75■□□□□ 0.59
H3F3B-210ENST00000591890 IGF1RP08069 1367 aa18.74■□□□□ 0.59
H3F3B-210ENST00000591890 RUSC2Q8N2Y8 1516 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms