RNA–Protein interactions for RNA: ENST00000592590.6

TMEM259-209, Transcript of transmembrane protein 259, humanhuman

TSL 5 BASIC

Gene TMEM259, Length 2,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-209ENST00000592590 NISCHQ9Y2I1 1504 aa39.78■■■■□ 3.96
TMEM259-209ENST00000592590 SHROOM4Q9ULL8 1493 aa34.32■■■■□ 3.08
TMEM259-209ENST00000592590 SUPT5HO00267 1087 aaKnown RBP33.7■■■□□ 2.99
TMEM259-209ENST00000592590 ZCCHC6Q5VYS8 1495 aaKnown RBP33.66■■■□□ 2.98
TMEM259-209ENST00000592590 CCDC180Q9P1Z9 1646 aa33.56■■■□□ 2.96
TMEM259-209ENST00000592590 DCAF8L2P0C7V8 631 aa33.26■■■□□ 2.91
TMEM259-209ENST00000592590 CHIC1Q5VXU3 224 aa32.74■■■□□ 2.83
TMEM259-209ENST00000592590 MYO15BQ96JP2 1530 aa32.68■■■□□ 2.82
TMEM259-209ENST00000592590 DCAF1Q9Y4B6 1507 aa32.49■■■□□ 2.79
TMEM259-209ENST00000592590 PCGF6Q9BYE7 350 aa31.94■■■□□ 2.7
TMEM259-209ENST00000592590 HRCP23327 699 aa31.93■■■□□ 2.7
TMEM259-209ENST00000592590 LOC105371045A0A1W2PR82 267 aa31.9■■■□□ 2.7
TMEM259-209ENST00000592590 ABCC9O60706 1549 aa31.76■■■□□ 2.67
TMEM259-209ENST00000592590 SCRIBQ14160 1630 aa31.75■■■□□ 2.67
TMEM259-209ENST00000592590 RSF1Q96T23 1441 aaPredicted RBP31.61■■■□□ 2.65
TMEM259-209ENST00000592590 PPARGC1BQ86YN6 1023 aaKnown RBP31.44■■■□□ 2.62
TMEM259-209ENST00000592590 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
TMEM259-209ENST00000592590 TRIM41Q8WV44 630 aa31.28■■■□□ 2.6
TMEM259-209ENST00000592590 FAM9AQ8IZU1 332 aaPredicted RBP31.19■■■□□ 2.58
TMEM259-209ENST00000592590 CECR2Q9BXF3 1484 aa31.17■■■□□ 2.58
TMEM259-209ENST00000592590 TRIM26Q12899 539 aaPredicted RBP31.16■■■□□ 2.58
TMEM259-209ENST00000592590 NACADO15069 1562 aa31.07■■■□□ 2.57
TMEM259-209ENST00000592590 EHMT2Q96KQ7 1210 aa31.03■■■□□ 2.56
TMEM259-209ENST00000592590 MROH2BQ7Z745 1585 aa31.02■■■□□ 2.56
TMEM259-209ENST00000592590 WIZO95785 1651 aa30.84■■■□□ 2.53
TMEM259-209ENST00000592590 BAZ1AQ9NRL2 1556 aaPredicted RBP30.54■■■□□ 2.48
TMEM259-209ENST00000592590 ZEB1P37275 1124 aaPredicted RBP30.42■■■□□ 2.46
TMEM259-209ENST00000592590 EIF4G1Q04637 1599 aaKnown RBP30.4■■■□□ 2.46
TMEM259-209ENST00000592590 ABCC8Q09428 1581 aa30.27■■■□□ 2.44
TMEM259-209ENST00000592590 TOP2AP11388 1531 aaKnown RBP30.26■■■□□ 2.43
TMEM259-209ENST00000592590 CCDC88BA6NC98 1476 aa30.25■■■□□ 2.43
TMEM259-209ENST00000592590 SMARCA4P51532 1647 aa30.24■■■□□ 2.43
TMEM259-209ENST00000592590 SMARCA2P51531 1590 aa30.15■■■□□ 2.42
TMEM259-209ENST00000592590 UNC13AQ9UPW8 1703 aa30.12■■■□□ 2.41
TMEM259-209ENST00000592590 PABPN1Q86U42 306 aaKnown RBP eCLIP30.1■■■□□ 2.411e-9■■□□□ 14
TMEM259-209ENST00000592590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.05■■■□□ 2.4
TMEM259-209ENST00000592590 SOGA1O94964 1423 aa30.04■■■□□ 2.4
TMEM259-209ENST00000592590 TTBK1Q5TCY1 1321 aaPredicted RBP30.04■■■□□ 2.4
TMEM259-209ENST00000592590 RUSC2Q8N2Y8 1516 aa29.92■■■□□ 2.38
TMEM259-209ENST00000592590 CEP162Q5TB80 1403 aa29.9■■■□□ 2.38
TMEM259-209ENST00000592590 CCER1Q8TC90 406 aaPredicted RBP29.89■■■□□ 2.38
TMEM259-209ENST00000592590 CSRNP3Q8WYN3 585 aa29.83■■■□□ 2.37
TMEM259-209ENST00000592590 BICRAQ9NZM4 1560 aa29.82■■■□□ 2.36
TMEM259-209ENST00000592590 UBTFP17480 764 aaKnown RBP29.8■■■□□ 2.36
TMEM259-209ENST00000592590 WRNQ14191 1432 aaPredicted RBP eCLIP29.8■■■□□ 2.365e-7■■■■■ 27.7
TMEM259-209ENST00000592590 TNIKQ9UKE5 1360 aa29.78■■■□□ 2.36
TMEM259-209ENST00000592590 EEA1Q15075 1411 aa29.67■■■□□ 2.34
TMEM259-209ENST00000592590 SCAF1Q9H7N4 1312 aaKnown RBP29.58■■■□□ 2.33
TMEM259-209ENST00000592590 GOLGA3Q08378 1498 aa29.58■■■□□ 2.33
TMEM259-209ENST00000592590 PEG3Q9GZU2 1588 aa29.57■■■□□ 2.32
TMEM259-209ENST00000592590 SYNJ1O43426 1573 aa29.53■■■□□ 2.32
TMEM259-209ENST00000592590 ATAD2BQ9ULI0 1458 aa29.49■■■□□ 2.31
TMEM259-209ENST00000592590 BAZ1BQ9UIG0 1483 aaKnown RBP29.41■■■□□ 2.3
TMEM259-209ENST00000592590 CEP164Q9UPV0 1460 aa29.38■■■□□ 2.29
TMEM259-209ENST00000592590 DIEXFQ68CQ4 756 aaKnown RBP29.36■■■□□ 2.29
TMEM259-209ENST00000592590 RANGAP1P46060 587 aaPredicted RBP29.35■■■□□ 2.29
TMEM259-209ENST00000592590 CLIP1P30622 1438 aa29.31■■■□□ 2.28
TMEM259-209ENST00000592590 HNRNPUL2Q1KMD3 747 aaKnown RBP29.29■■■□□ 2.28
TMEM259-209ENST00000592590 KIF21BO75037 1637 aa29.28■■■□□ 2.28
TMEM259-209ENST00000592590 RAPGEF2Q9Y4G8 1499 aa29.27■■■□□ 2.28
TMEM259-209ENST00000592590 NEUROD1Q13562 356 aa29.22■■■□□ 2.27
TMEM259-209ENST00000592590 ACIN1Q9UKV3 1341 aaKnown RBP29.18■■■□□ 2.26
TMEM259-209ENST00000592590 VPS8Q8N3P4 1428 aa29.16■■■□□ 2.26
TMEM259-209ENST00000592590 APLP2Q06481 763 aa29.08■■■□□ 2.25
TMEM259-209ENST00000592590 ZNF316A6NFI3 1004 aaPredicted RBP29.08■■■□□ 2.24
TMEM259-209ENST00000592590 TOP2BQ02880 1626 aa29.06■■■□□ 2.24
TMEM259-209ENST00000592590 CENPBP07199 599 aaPredicted RBP28.91■■■□□ 2.22
TMEM259-209ENST00000592590 GTF3C3Q9Y5Q9 886 aa28.91■■■□□ 2.22
TMEM259-209ENST00000592590 BIVM-ERCC5R4GMW8 1640 aa28.9■■■□□ 2.22
TMEM259-209ENST00000592590 PRXQ9BXM0 1461 aa28.88■■■□□ 2.21
TMEM259-209ENST00000592590 CUX1P39880 1505 aa28.84■■■□□ 2.21
TMEM259-209ENST00000592590 NCAPD3P42695 1498 aa28.84■■■□□ 2.21
TMEM259-209ENST00000592590 KANK4Q5T7N3 995 aaPredicted RBP28.82■■■□□ 2.2
TMEM259-209ENST00000592590 ARAP1Q96P48 1450 aa28.82■■■□□ 2.2
TMEM259-209ENST00000592590 YTHDC1Q96MU7 727 aaKnown RBP28.8■■■□□ 2.2
TMEM259-209ENST00000592590 PELP1Q8IZL8 1130 aaKnown RBP28.8■■■□□ 2.2
TMEM259-209ENST00000592590 ERICH3Q5RHP9 1530 aa28.78■■■□□ 2.2
TMEM259-209ENST00000592590 MIER1Q8N108 512 aa28.77■■■□□ 2.2
TMEM259-209ENST00000592590 HMGXB3Q12766 1538 aa28.77■■■□□ 2.2
TMEM259-209ENST00000592590 KIF27Q86VH2 1401 aa28.71■■■□□ 2.19
TMEM259-209ENST00000592590 CFTRP13569 1480 aa28.68■■■□□ 2.18
TMEM259-209ENST00000592590 DHX57Q6P158 1386 aaKnown RBP28.61■■■□□ 2.17
TMEM259-209ENST00000592590 ARHGAP35Q9NRY4 1499 aa28.55■■■□□ 2.16
TMEM259-209ENST00000592590 ITGAEP38570 1179 aa28.5■■■□□ 2.15
TMEM259-209ENST00000592590 RRBP1Q9P2E9 1410 aaKnown RBP28.48■■■□□ 2.15
TMEM259-209ENST00000592590 CUX2O14529 1486 aa28.47■■■□□ 2.15
TMEM259-209ENST00000592590 IGF1RP08069 1367 aa28.46■■■□□ 2.15
TMEM259-209ENST00000592590 CLSPNQ9HAW4 1339 aa28.44■■■□□ 2.14
TMEM259-209ENST00000592590 CCNB3Q8WWL7 1395 aa28.42■■■□□ 2.14
TMEM259-209ENST00000592590 CADPSQ9ULU8 1353 aa28.36■■■□□ 2.13
TMEM259-209ENST00000592590 CARMIL1Q5VZK9 1371 aa28.33■■■□□ 2.13
TMEM259-209ENST00000592590 FGD5Q6ZNL6 1462 aa28.31■■■□□ 2.12
TMEM259-209ENST00000592590 P3H3Q8IVL6 736 aa28.27■■■□□ 2.12
TMEM259-209ENST00000592590 PRDM2Q13029 1718 aa28.23■■■□□ 2.11
TMEM259-209ENST00000592590 RAB3GAP2Q9H2M9 1393 aa28.21■■■□□ 2.11
TMEM259-209ENST00000592590 TIAM1Q13009 1591 aa28.19■■■□□ 2.1
TMEM259-209ENST00000592590 ATP1B4Q9UN42 357 aaPredicted RBP28.18■■■□□ 2.1
TMEM259-209ENST00000592590 PHLDB1Q86UU1 1377 aa28.15■■■□□ 2.1
TMEM259-209ENST00000592590 LRRC9Q6ZRR7 1453 aa28.13■■■□□ 2.09
TMEM259-209ENST00000592590 FAM50AQ14320 339 aaKnown RBP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms