RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 NISCHQ9Y2I1 1504 aa47.95■■■■■ 5.27
LTBP4-239ENST00000622565 CCDC180Q9P1Z9 1646 aa42.78■■■■■ 4.44
LTBP4-239ENST00000622565 ABCC9O60706 1549 aa42.46■■■■■ 4.39
LTBP4-239ENST00000622565 RB1CC1Q8TDY2 1594 aa40.52■■■■■ 4.08
LTBP4-239ENST00000622565 NACADO15069 1562 aa40.35■■■■■ 4.05
LTBP4-239ENST00000622565 DCAF8L2P0C7V8 631 aa40.26■■■■■ 4.04
LTBP4-239ENST00000622565 MYO15BQ96JP2 1530 aa39.93■■■■□ 3.98
LTBP4-239ENST00000622565 ZCCHC6Q5VYS8 1495 aaKnown RBP39.84■■■■□ 3.97
LTBP4-239ENST00000622565 UNC13AQ9UPW8 1703 aa39.65■■■■□ 3.94
LTBP4-239ENST00000622565 PABPN1Q86U42 306 aaKnown RBP eCLIP39.62■■■■□ 3.93
LTBP4-239ENST00000622565 DCAF1Q9Y4B6 1507 aa39.6■■■■□ 3.93
LTBP4-239ENST00000622565 DNAJC5BQ9UF47 199 aa39.54■■■■□ 3.92
LTBP4-239ENST00000622565 BICRAQ9NZM4 1560 aa39.44■■■■□ 3.9
LTBP4-239ENST00000622565 SCRIBQ14160 1630 aa39.08■■■■□ 3.85
LTBP4-239ENST00000622565 SHROOM4Q9ULL8 1493 aa38.8■■■■□ 3.8
LTBP4-239ENST00000622565 EIF4G1Q04637 1599 aaKnown RBP38.38■■■■□ 3.73
LTBP4-239ENST00000622565 CC2D2AQ9P2K1 1620 aa38.36■■■■□ 3.73
LTBP4-239ENST00000622565 CECR2Q9BXF3 1484 aa38.17■■■■□ 3.7
LTBP4-239ENST00000622565 SMARCA4P51532 1647 aa37.31■■■■□ 3.56
LTBP4-239ENST00000622565 NCAPD3P42695 1498 aa37.29■■■■□ 3.56
LTBP4-239ENST00000622565 ATAD2BQ9ULI0 1458 aa37.26■■■■□ 3.55
LTBP4-239ENST00000622565 BAZ1AQ9NRL2 1556 aaPredicted RBP37.15■■■■□ 3.54
LTBP4-239ENST00000622565 SMARCA2P51531 1590 aa37.1■■■■□ 3.53
LTBP4-239ENST00000622565 HMGXB3Q12766 1538 aa37.03■■■■□ 3.52
LTBP4-239ENST00000622565 MROH2BQ7Z745 1585 aa37■■■■□ 3.51
LTBP4-239ENST00000622565 PEG3Q9GZU2 1588 aa36.94■■■■□ 3.5
LTBP4-239ENST00000622565 BAZ1BQ9UIG0 1483 aaKnown RBP36.88■■■■□ 3.49
LTBP4-239ENST00000622565 NESP48681 1621 aa36.63■■■■□ 3.45
LTBP4-239ENST00000622565 WIZO95785 1651 aa36.55■■■■□ 3.44
LTBP4-239ENST00000622565 ERCC6Q03468 1493 aa36.55■■■■□ 3.44
LTBP4-239ENST00000622565 RSF1Q96T23 1441 aaPredicted RBP36.36■■■■□ 3.41
LTBP4-239ENST00000622565 CUX2O14529 1486 aa36.35■■■■□ 3.41
LTBP4-239ENST00000622565 LAMC3Q9Y6N6 1575 aa36.34■■■■□ 3.41
LTBP4-239ENST00000622565 CADPSQ9ULU8 1353 aa36.16■■■■□ 3.38
LTBP4-239ENST00000622565 THOC2Q8NI27 1593 aaKnown RBP36.14■■■■□ 3.38
LTBP4-239ENST00000622565 KIF21AQ7Z4S6 1674 aa36.12■■■■□ 3.37
LTBP4-239ENST00000622565 PDS5BQ9NTI5 1447 aa36.1■■■■□ 3.37
LTBP4-239ENST00000622565 TOP2AP11388 1531 aaKnown RBP36.08■■■■□ 3.37
LTBP4-239ENST00000622565 DNAJC5Q9H3Z4 198 aa35.89■■■■□ 3.34
LTBP4-239ENST00000622565 CFTRP13569 1480 aa35.86■■■■□ 3.33
LTBP4-239ENST00000622565 MRC2Q9UBG0 1479 aa35.8■■■■□ 3.32
LTBP4-239ENST00000622565 FANCD2Q9BXW9 1451 aa35.76■■■■□ 3.32
LTBP4-239ENST00000622565 CEP164Q9UPV0 1460 aa35.73■■■■□ 3.31
LTBP4-239ENST00000622565 WDR62O43379 1518 aa35.72■■■■□ 3.31
LTBP4-239ENST00000622565 CCDC88BA6NC98 1476 aa35.71■■■■□ 3.31
LTBP4-239ENST00000622565 URB2Q14146 1524 aaKnown RBP35.48■■■■□ 3.27
LTBP4-239ENST00000622565 PRDM2Q13029 1718 aa35.46■■■■□ 3.27
LTBP4-239ENST00000622565 TOPBP1Q92547 1522 aa35.14■■■■□ 3.22
LTBP4-239ENST00000622565 SUPT5HO00267 1087 aaKnown RBP35.05■■■■□ 3.2
LTBP4-239ENST00000622565 DNMBPQ6XZF7 1577 aa35.03■■■■□ 3.2
LTBP4-239ENST00000622565 ABCC8Q09428 1581 aa35■■■■□ 3.19
LTBP4-239ENST00000622565 IFT140Q96RY7 1462 aa35■■■■□ 3.19
LTBP4-239ENST00000622565 ZNF608Q9ULD9 1512 aaPredicted RBP34.99■■■■□ 3.19
LTBP4-239ENST00000622565 TARBP1Q13395 1621 aaKnown RBP34.82■■■■□ 3.16
LTBP4-239ENST00000622565 POLA1P09884 1462 aaPredicted RBP34.82■■■■□ 3.16
LTBP4-239ENST00000622565 EIF4G3O43432 1585 aaKnown RBP34.78■■■■□ 3.16
LTBP4-239ENST00000622565 OSCARQ8IYS5 282 aa34.75■■■■□ 3.15
LTBP4-239ENST00000622565 CUX1P39880 1505 aa34.72■■■■□ 3.15
LTBP4-239ENST00000622565 RAD54L2Q9Y4B4 1467 aa34.71■■■■□ 3.15
LTBP4-239ENST00000622565 AQRO60306 1485 aaKnown RBP eCLIP34.71■■■■□ 3.156e-7■■□□□ 14
LTBP4-239ENST00000622565 FGD5Q6ZNL6 1462 aa34.66■■■■□ 3.14
LTBP4-239ENST00000622565 SOGA1O94964 1423 aa34.64■■■■□ 3.14
LTBP4-239ENST00000622565 TDRD9Q8NDG6 1382 aaKnown RBP34.55■■■■□ 3.12
LTBP4-239ENST00000622565 TRIM41Q8WV44 630 aa34.49■■■■□ 3.11
LTBP4-239ENST00000622565 CHD1O14646 1710 aa34.41■■■■□ 3.1
LTBP4-239ENST00000622565 WDR97A6NE52 1622 aa34.4■■■■□ 3.1
LTBP4-239ENST00000622565 SNAPC4Q5SXM2 1469 aa34.34■■■■□ 3.09
LTBP4-239ENST00000622565 FBLN2P98095 1184 aa34.33■■■■□ 3.09
LTBP4-239ENST00000622565 RIMBP3CA6NJZ7 1639 aa34.31■■■■□ 3.08
LTBP4-239ENST00000622565 RIMBP3BA6NNM3 1639 aa34.31■■■■□ 3.08
LTBP4-239ENST00000622565 RIMBP3Q9UFD9 1639 aa34.31■■■■□ 3.08
LTBP4-239ENST00000622565 GRIN2BQ13224 1484 aa34.28■■■■□ 3.08
LTBP4-239ENST00000622565 ABCA10Q8WWZ4 1543 aa34.27■■■■□ 3.08
LTBP4-239ENST00000622565 SYNJ1O43426 1573 aa34.26■■■■□ 3.07
LTBP4-239ENST00000622565 WRNQ14191 1432 aaPredicted RBP eCLIP34.25■■■■□ 3.07
LTBP4-239ENST00000622565 ARHGEF11O15085 1522 aa34.25■■■■□ 3.07
LTBP4-239ENST00000622565 BIVM-ERCC5R4GMW8 1640 aa34.24■■■■□ 3.07
LTBP4-239ENST00000622565 TOP2BQ02880 1626 aa34.23■■■■□ 3.07
LTBP4-239ENST00000622565 GAPVD1Q14C86 1478 aa34.22■■■■□ 3.07
LTBP4-239ENST00000622565 MAGI1Q96QZ7 1491 aaPredicted RBP34.22■■■■□ 3.07
LTBP4-239ENST00000622565 ABCA5Q8WWZ7 1642 aa34.2■■■■□ 3.07
LTBP4-239ENST00000622565 PBRM1Q86U86 1689 aa34.18■■■■□ 3.06
LTBP4-239ENST00000622565 CHMP7Q8WUX9 453 aaPredicted RBP34.13■■■■□ 3.05
LTBP4-239ENST00000622565 SYNJ2O15056 1496 aa34.12■■■■□ 3.05
LTBP4-239ENST00000622565 CLASP1Q7Z460 1538 aa34.07■■■■□ 3.04
LTBP4-239ENST00000622565 ARAP1Q96P48 1450 aa33.96■■■■□ 3.03
LTBP4-239ENST00000622565 CYB5RLQ6IPT4 315 aa33.96■■■■□ 3.03
LTBP4-239ENST00000622565 ADAMTS12P58397 1594 aa33.9■■■■□ 3.02
LTBP4-239ENST00000622565 GRIN2AQ12879 1464 aa33.86■■■■□ 3.01
LTBP4-239ENST00000622565 ERICH3Q5RHP9 1530 aa33.83■■■■□ 3.01
LTBP4-239ENST00000622565 FHAD1B1AJZ9 1412 aa33.79■■■■□ 3
LTBP4-239ENST00000622565 CEP170Q5SW79 1584 aa33.76■■■□□ 2.99
LTBP4-239ENST00000622565 NUP160Q12769 1436 aa33.74■■■□□ 2.99
LTBP4-239ENST00000622565 ERCC6L2Q5T890 1561 aa33.63■■■□□ 2.97
LTBP4-239ENST00000622565 IGF1RP08069 1367 aa33.55■■■□□ 2.96
LTBP4-239ENST00000622565 KIF27Q86VH2 1401 aa33.54■■■□□ 2.96
LTBP4-239ENST00000622565 SHROOM2Q13796 1616 aa33.54■■■□□ 2.96
LTBP4-239ENST00000622565 RUSC2Q8N2Y8 1516 aa33.43■■■□□ 2.94
LTBP4-239ENST00000622565 TRHP20396 242 aaPredicted RBP33.4■■■□□ 2.94
LTBP4-239ENST00000622565 CUL7Q14999 1698 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms