RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 NISCHQ9Y2I1 1504 aa46.55■■■■■ 5.04
CTDSP1-213ENST00000496785 CCDC180Q9P1Z9 1646 aa41.44■■■■■ 4.22
CTDSP1-213ENST00000496785 ABCC9O60706 1549 aa40.4■■■■■ 4.06
CTDSP1-213ENST00000496785 RB1CC1Q8TDY2 1594 aa38.99■■■■□ 3.83
CTDSP1-213ENST00000496785 NACADO15069 1562 aa38.95■■■■□ 3.83
CTDSP1-213ENST00000496785 DCAF8L2P0C7V8 631 aa38.85■■■■□ 3.81
CTDSP1-213ENST00000496785 ZCCHC6Q5VYS8 1495 aaKnown RBP38.8■■■■□ 3.8
CTDSP1-213ENST00000496785 MYO15BQ96JP2 1530 aa38.77■■■■□ 3.8
CTDSP1-213ENST00000496785 DCAF1Q9Y4B6 1507 aa38.58■■■■□ 3.77
CTDSP1-213ENST00000496785 UNC13AQ9UPW8 1703 aa37.96■■■■□ 3.67
CTDSP1-213ENST00000496785 SCRIBQ14160 1630 aa37.72■■■■□ 3.63
CTDSP1-213ENST00000496785 PABPN1Q86U42 306 aaKnown RBP eCLIP37.72■■■■□ 3.63
CTDSP1-213ENST00000496785 BICRAQ9NZM4 1560 aa37.68■■■■□ 3.62
CTDSP1-213ENST00000496785 SHROOM4Q9ULL8 1493 aa37.49■■■■□ 3.59
CTDSP1-213ENST00000496785 DNAJC5BQ9UF47 199 aa36.92■■■■□ 3.5
CTDSP1-213ENST00000496785 EIF4G1Q04637 1599 aaKnown RBP36.74■■■■□ 3.47
CTDSP1-213ENST00000496785 CC2D2AQ9P2K1 1620 aa36.56■■■■□ 3.44
CTDSP1-213ENST00000496785 CECR2Q9BXF3 1484 aa36.34■■■■□ 3.41
CTDSP1-213ENST00000496785 BAZ1AQ9NRL2 1556 aaPredicted RBP36.14■■■■□ 3.38
CTDSP1-213ENST00000496785 SMARCA4P51532 1647 aa36.12■■■■□ 3.37
CTDSP1-213ENST00000496785 SMARCA2P51531 1590 aa35.93■■■■□ 3.34
CTDSP1-213ENST00000496785 NCAPD3P42695 1498 aa35.91■■■■□ 3.34
CTDSP1-213ENST00000496785 ATAD2BQ9ULI0 1458 aa35.9■■■■□ 3.34
CTDSP1-213ENST00000496785 MROH2BQ7Z745 1585 aa35.83■■■■□ 3.33
CTDSP1-213ENST00000496785 PEG3Q9GZU2 1588 aa35.79■■■■□ 3.32
CTDSP1-213ENST00000496785 HMGXB3Q12766 1538 aa35.77■■■■□ 3.32
CTDSP1-213ENST00000496785 BAZ1BQ9UIG0 1483 aaKnown RBP35.66■■■■□ 3.3
CTDSP1-213ENST00000496785 RSF1Q96T23 1441 aaPredicted RBP35.46■■■■□ 3.27
CTDSP1-213ENST00000496785 WIZO95785 1651 aa35.43■■■■□ 3.26
CTDSP1-213ENST00000496785 TOP2AP11388 1531 aaKnown RBP35.15■■■■□ 3.22
CTDSP1-213ENST00000496785 LAMC3Q9Y6N6 1575 aa34.99■■■■□ 3.19
CTDSP1-213ENST00000496785 NESP48681 1621 aa34.93■■■■□ 3.18
CTDSP1-213ENST00000496785 ERCC6Q03468 1493 aa34.9■■■■□ 3.18
CTDSP1-213ENST00000496785 CADPSQ9ULU8 1353 aa34.87■■■■□ 3.17
CTDSP1-213ENST00000496785 PDS5BQ9NTI5 1447 aa34.77■■■■□ 3.16
CTDSP1-213ENST00000496785 CCDC88BA6NC98 1476 aa34.67■■■■□ 3.14
CTDSP1-213ENST00000496785 CFTRP13569 1480 aa34.65■■■■□ 3.14
CTDSP1-213ENST00000496785 SUPT5HO00267 1087 aaKnown RBP34.58■■■■□ 3.13
CTDSP1-213ENST00000496785 KIF21AQ7Z4S6 1674 aa34.55■■■■□ 3.12
CTDSP1-213ENST00000496785 CUX2O14529 1486 aa34.54■■■■□ 3.12
CTDSP1-213ENST00000496785 FANCD2Q9BXW9 1451 aa34.46■■■■□ 3.11
CTDSP1-213ENST00000496785 THOC2Q8NI27 1593 aaKnown RBP34.45■■■■□ 3.11
CTDSP1-213ENST00000496785 CEP164Q9UPV0 1460 aa34.45■■■■□ 3.1
CTDSP1-213ENST00000496785 PRDM2Q13029 1718 aa34.41■■■■□ 3.1
CTDSP1-213ENST00000496785 MRC2Q9UBG0 1479 aa34.37■■■■□ 3.09
CTDSP1-213ENST00000496785 WDR62O43379 1518 aa34.24■■■■□ 3.07
CTDSP1-213ENST00000496785 URB2Q14146 1524 aaKnown RBP34.06■■■■□ 3.04
CTDSP1-213ENST00000496785 ABCC8Q09428 1581 aa34■■■■□ 3.03
CTDSP1-213ENST00000496785 DNMBPQ6XZF7 1577 aa33.89■■■■□ 3.02
CTDSP1-213ENST00000496785 TOPBP1Q92547 1522 aa33.89■■■■□ 3.02
CTDSP1-213ENST00000496785 IFT140Q96RY7 1462 aa33.73■■■□□ 2.99
CTDSP1-213ENST00000496785 CUX1P39880 1505 aa33.62■■■□□ 2.97
CTDSP1-213ENST00000496785 POLA1P09884 1462 aaPredicted RBP33.61■■■□□ 2.97
CTDSP1-213ENST00000496785 FGD5Q6ZNL6 1462 aa33.54■■■□□ 2.96
CTDSP1-213ENST00000496785 TARBP1Q13395 1621 aaKnown RBP33.5■■■□□ 2.95
CTDSP1-213ENST00000496785 SOGA1O94964 1423 aa33.49■■■□□ 2.95
CTDSP1-213ENST00000496785 WRNQ14191 1432 aaPredicted RBP eCLIP33.49■■■□□ 2.95
CTDSP1-213ENST00000496785 ZNF608Q9ULD9 1512 aaPredicted RBP33.46■■■□□ 2.95
CTDSP1-213ENST00000496785 RAD54L2Q9Y4B4 1467 aa33.41■■■□□ 2.94
CTDSP1-213ENST00000496785 TOP2BQ02880 1626 aa33.39■■■□□ 2.94
CTDSP1-213ENST00000496785 EIF4G3O43432 1585 aaKnown RBP33.39■■■□□ 2.94
CTDSP1-213ENST00000496785 BIVM-ERCC5R4GMW8 1640 aa33.39■■■□□ 2.93
CTDSP1-213ENST00000496785 WDR97A6NE52 1622 aa33.37■■■□□ 2.93
CTDSP1-213ENST00000496785 DNAJC5Q9H3Z4 198 aa33.35■■■□□ 2.93
CTDSP1-213ENST00000496785 SYNJ1O43426 1573 aa33.33■■■□□ 2.93
CTDSP1-213ENST00000496785 AQRO60306 1485 aaKnown RBP eCLIP33.29■■■□□ 2.921e-17■■■■■ 82.2
CTDSP1-213ENST00000496785 TDRD9Q8NDG6 1382 aaKnown RBP33.25■■■□□ 2.91
CTDSP1-213ENST00000496785 ABCA10Q8WWZ4 1543 aa33.24■■■□□ 2.91
CTDSP1-213ENST00000496785 GRIN2BQ13224 1484 aa33.12■■■□□ 2.89
CTDSP1-213ENST00000496785 GAPVD1Q14C86 1478 aa33.12■■■□□ 2.89
CTDSP1-213ENST00000496785 OSCARQ8IYS5 282 aa33.09■■■□□ 2.89
CTDSP1-213ENST00000496785 ABCA5Q8WWZ7 1642 aa33.08■■■□□ 2.89
CTDSP1-213ENST00000496785 MAGI1Q96QZ7 1491 aaPredicted RBP33.05■■■□□ 2.88
CTDSP1-213ENST00000496785 SNAPC4Q5SXM2 1469 aa33.03■■■□□ 2.88
CTDSP1-213ENST00000496785 PBRM1Q86U86 1689 aa33.01■■■□□ 2.88
CTDSP1-213ENST00000496785 CHD1O14646 1710 aa32.94■■■□□ 2.86
CTDSP1-213ENST00000496785 FBLN2P98095 1184 aa32.93■■■□□ 2.86
CTDSP1-213ENST00000496785 SYNJ2O15056 1496 aa32.9■■■□□ 2.86
CTDSP1-213ENST00000496785 CHMP7Q8WUX9 453 aaPredicted RBP32.89■■■□□ 2.86
CTDSP1-213ENST00000496785 ERICH3Q5RHP9 1530 aa32.87■■■□□ 2.85
CTDSP1-213ENST00000496785 KIF27Q86VH2 1401 aa32.82■■■□□ 2.84
CTDSP1-213ENST00000496785 ADAMTS12P58397 1594 aa32.78■■■□□ 2.84
CTDSP1-213ENST00000496785 FHAD1B1AJZ9 1412 aa32.76■■■□□ 2.83
CTDSP1-213ENST00000496785 TRIM41Q8WV44 630 aa32.71■■■□□ 2.83
CTDSP1-213ENST00000496785 GRIN2AQ12879 1464 aa32.67■■■□□ 2.82
CTDSP1-213ENST00000496785 CLASP1Q7Z460 1538 aa32.6■■■□□ 2.81
CTDSP1-213ENST00000496785 CUL7Q14999 1698 aa32.59■■■□□ 2.81
CTDSP1-213ENST00000496785 IGF1RP08069 1367 aa32.59■■■□□ 2.81
CTDSP1-213ENST00000496785 NUP160Q12769 1436 aa32.52■■■□□ 2.8
CTDSP1-213ENST00000496785 ARHGEF11O15085 1522 aa32.52■■■□□ 2.8
CTDSP1-213ENST00000496785 RIMBP3CA6NJZ7 1639 aa32.5■■■□□ 2.79
CTDSP1-213ENST00000496785 RIMBP3BA6NNM3 1639 aa32.5■■■□□ 2.79
CTDSP1-213ENST00000496785 RIMBP3Q9UFD9 1639 aa32.5■■■□□ 2.79
CTDSP1-213ENST00000496785 CEP170Q5SW79 1584 aa32.46■■■□□ 2.79
CTDSP1-213ENST00000496785 CARMIL1Q5VZK9 1371 aa32.45■■■□□ 2.78
CTDSP1-213ENST00000496785 RUSC2Q8N2Y8 1516 aa32.36■■■□□ 2.77
CTDSP1-213ENST00000496785 CHIC1Q5VXU3 224 aa32.28■■■□□ 2.76
CTDSP1-213ENST00000496785 RAPGEF2Q9Y4G8 1499 aa32.28■■■□□ 2.76
CTDSP1-213ENST00000496785 EEA1Q15075 1411 aa32.27■■■□□ 2.76
CTDSP1-213ENST00000496785 SHROOM2Q13796 1616 aa32.26■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms