RNA–Protein interactions for RNA: ENST00000597816.5

LTBP4-218, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-218ENST00000597816 NISCHQ9Y2I1 1504 aa39.27■■■■□ 3.88
LTBP4-218ENST00000597816 CCDC180Q9P1Z9 1646 aa34.92■■■■□ 3.18
LTBP4-218ENST00000597816 ABCC9O60706 1549 aa34.41■■■■□ 3.1
LTBP4-218ENST00000597816 DCAF8L2P0C7V8 631 aa33.02■■■□□ 2.88
LTBP4-218ENST00000597816 RB1CC1Q8TDY2 1594 aa33.01■■■□□ 2.88
LTBP4-218ENST00000597816 NACADO15069 1562 aa32.94■■■□□ 2.86
LTBP4-218ENST00000597816 MYO15BQ96JP2 1530 aa32.69■■■□□ 2.82
LTBP4-218ENST00000597816 ZCCHC6Q5VYS8 1495 aaKnown RBP32.63■■■□□ 2.81
LTBP4-218ENST00000597816 DCAF1Q9Y4B6 1507 aa32.47■■■□□ 2.79
LTBP4-218ENST00000597816 PABPN1Q86U42 306 aaKnown RBP eCLIP32.2■■■□□ 2.75
LTBP4-218ENST00000597816 UNC13AQ9UPW8 1703 aa32.2■■■□□ 2.74
LTBP4-218ENST00000597816 BICRAQ9NZM4 1560 aa31.99■■■□□ 2.71
LTBP4-218ENST00000597816 SCRIBQ14160 1630 aa31.87■■■□□ 2.69
LTBP4-218ENST00000597816 DNAJC5BQ9UF47 199 aa31.82■■■□□ 2.68
LTBP4-218ENST00000597816 SHROOM4Q9ULL8 1493 aa31.65■■■□□ 2.66
LTBP4-218ENST00000597816 EIF4G1Q04637 1599 aaKnown RBP31.17■■■□□ 2.58
LTBP4-218ENST00000597816 CC2D2AQ9P2K1 1620 aa31.09■■■□□ 2.57
LTBP4-218ENST00000597816 CECR2Q9BXF3 1484 aa30.95■■■□□ 2.55
LTBP4-218ENST00000597816 SMARCA4P51532 1647 aa30.47■■■□□ 2.47
LTBP4-218ENST00000597816 BAZ1AQ9NRL2 1556 aaPredicted RBP30.44■■■□□ 2.46
LTBP4-218ENST00000597816 NCAPD3P42695 1498 aa30.43■■■□□ 2.46
LTBP4-218ENST00000597816 ATAD2BQ9ULI0 1458 aa30.4■■■□□ 2.46
LTBP4-218ENST00000597816 SMARCA2P51531 1590 aa30.34■■■□□ 2.45
LTBP4-218ENST00000597816 MROH2BQ7Z745 1585 aa30.25■■■□□ 2.43
LTBP4-218ENST00000597816 HMGXB3Q12766 1538 aa30.2■■■□□ 2.42
LTBP4-218ENST00000597816 PEG3Q9GZU2 1588 aa30.18■■■□□ 2.42
LTBP4-218ENST00000597816 BAZ1BQ9UIG0 1483 aaKnown RBP30.12■■■□□ 2.41
LTBP4-218ENST00000597816 WIZO95785 1651 aa29.9■■■□□ 2.38
LTBP4-218ENST00000597816 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
LTBP4-218ENST00000597816 NESP48681 1621 aa29.72■■■□□ 2.35
LTBP4-218ENST00000597816 ERCC6Q03468 1493 aa29.69■■■□□ 2.34
LTBP4-218ENST00000597816 LAMC3Q9Y6N6 1575 aa29.61■■■□□ 2.33
LTBP4-218ENST00000597816 TOP2AP11388 1531 aaKnown RBP29.56■■■□□ 2.32
LTBP4-218ENST00000597816 CADPSQ9ULU8 1353 aa29.55■■■□□ 2.32
LTBP4-218ENST00000597816 PDS5BQ9NTI5 1447 aa29.48■■■□□ 2.31
LTBP4-218ENST00000597816 CUX2O14529 1486 aa29.42■■■□□ 2.3
LTBP4-218ENST00000597816 KIF21AQ7Z4S6 1674 aa29.31■■■□□ 2.28
LTBP4-218ENST00000597816 CFTRP13569 1480 aa29.3■■■□□ 2.28
LTBP4-218ENST00000597816 CCDC88BA6NC98 1476 aa29.28■■■□□ 2.28
LTBP4-218ENST00000597816 THOC2Q8NI27 1593 aaKnown RBP29.24■■■□□ 2.27
LTBP4-218ENST00000597816 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
LTBP4-218ENST00000597816 CEP164Q9UPV0 1460 aa29.14■■■□□ 2.26
LTBP4-218ENST00000597816 MRC2Q9UBG0 1479 aa29.13■■■□□ 2.25
LTBP4-218ENST00000597816 SUPT5HO00267 1087 aaKnown RBP29.07■■■□□ 2.24
LTBP4-218ENST00000597816 DNAJC5Q9H3Z4 198 aa29.05■■■□□ 2.24
LTBP4-218ENST00000597816 WDR62O43379 1518 aa29.01■■■□□ 2.23
LTBP4-218ENST00000597816 PRDM2Q13029 1718 aa28.97■■■□□ 2.23
LTBP4-218ENST00000597816 URB2Q14146 1524 aaKnown RBP28.88■■■□□ 2.21
LTBP4-218ENST00000597816 ABCC8Q09428 1581 aa28.71■■■□□ 2.19
LTBP4-218ENST00000597816 TOPBP1Q92547 1522 aa28.68■■■□□ 2.18
LTBP4-218ENST00000597816 DNMBPQ6XZF7 1577 aa28.61■■■□□ 2.17
LTBP4-218ENST00000597816 IFT140Q96RY7 1462 aa28.56■■■□□ 2.16
LTBP4-218ENST00000597816 ZNF608Q9ULD9 1512 aaPredicted RBP28.43■■■□□ 2.14
LTBP4-218ENST00000597816 POLA1P09884 1462 aaPredicted RBP28.41■■■□□ 2.14
LTBP4-218ENST00000597816 CUX1P39880 1505 aa28.38■■■□□ 2.13
LTBP4-218ENST00000597816 SOGA1O94964 1423 aa28.36■■■□□ 2.13
LTBP4-218ENST00000597816 TARBP1Q13395 1621 aaKnown RBP28.35■■■□□ 2.13
LTBP4-218ENST00000597816 FGD5Q6ZNL6 1462 aa28.32■■■□□ 2.12
LTBP4-218ENST00000597816 RAD54L2Q9Y4B4 1467 aa28.32■■■□□ 2.12
LTBP4-218ENST00000597816 OSCARQ8IYS5 282 aa28.29■■■□□ 2.12
LTBP4-218ENST00000597816 AQRO60306 1485 aaKnown RBP eCLIP28.28■■■□□ 2.121e-6■■□□□ 14.2
LTBP4-218ENST00000597816 EIF4G3O43432 1585 aaKnown RBP28.24■■■□□ 2.11
LTBP4-218ENST00000597816 TDRD9Q8NDG6 1382 aaKnown RBP28.23■■■□□ 2.11
LTBP4-218ENST00000597816 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
LTBP4-218ENST00000597816 WDR97A6NE52 1622 aa28.12■■■□□ 2.09
LTBP4-218ENST00000597816 TOP2BQ02880 1626 aa28.09■■■□□ 2.09
LTBP4-218ENST00000597816 BIVM-ERCC5R4GMW8 1640 aa28.06■■■□□ 2.08
LTBP4-218ENST00000597816 SYNJ1O43426 1573 aa28.05■■■□□ 2.08
LTBP4-218ENST00000597816 FBLN2P98095 1184 aa28.05■■■□□ 2.08
LTBP4-218ENST00000597816 ABCA10Q8WWZ4 1543 aa28.05■■■□□ 2.08
LTBP4-218ENST00000597816 GRIN2BQ13224 1484 aa28.02■■■□□ 2.08
LTBP4-218ENST00000597816 GAPVD1Q14C86 1478 aa28■■■□□ 2.07
LTBP4-218ENST00000597816 SNAPC4Q5SXM2 1469 aa27.96■■■□□ 2.07
LTBP4-218ENST00000597816 CHMP7Q8WUX9 453 aaPredicted RBP27.95■■■□□ 2.06
LTBP4-218ENST00000597816 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.06
LTBP4-218ENST00000597816 CHD1O14646 1710 aa27.93■■■□□ 2.06
LTBP4-218ENST00000597816 ABCA5Q8WWZ7 1642 aa27.89■■■□□ 2.06
LTBP4-218ENST00000597816 PBRM1Q86U86 1689 aa27.87■■■□□ 2.05
LTBP4-218ENST00000597816 SYNJ2O15056 1496 aa27.84■■■□□ 2.05
LTBP4-218ENST00000597816 TRIM41Q8WV44 630 aa27.79■■■□□ 2.04
LTBP4-218ENST00000597816 RIMBP3CA6NJZ7 1639 aa27.71■■■□□ 2.03
LTBP4-218ENST00000597816 RIMBP3BA6NNM3 1639 aa27.71■■■□□ 2.03
LTBP4-218ENST00000597816 RIMBP3Q9UFD9 1639 aa27.71■■■□□ 2.03
LTBP4-218ENST00000597816 ARHGEF11O15085 1522 aa27.71■■■□□ 2.03
LTBP4-218ENST00000597816 ERICH3Q5RHP9 1530 aa27.71■■■□□ 2.03
LTBP4-218ENST00000597816 FHAD1B1AJZ9 1412 aa27.68■■■□□ 2.02
LTBP4-218ENST00000597816 CLASP1Q7Z460 1538 aa27.64■■■□□ 2.02
LTBP4-218ENST00000597816 ADAMTS12P58397 1594 aa27.64■■■□□ 2.01
LTBP4-218ENST00000597816 GRIN2AQ12879 1464 aa27.63■■■□□ 2.01
LTBP4-218ENST00000597816 KIF27Q86VH2 1401 aa27.62■■■□□ 2.01
LTBP4-218ENST00000597816 CYB5RLQ6IPT4 315 aa27.57■■■□□ 2
LTBP4-218ENST00000597816 IGF1RP08069 1367 aa27.56■■■□□ 2
LTBP4-218ENST00000597816 NUP160Q12769 1436 aa27.52■■■□□ 2
LTBP4-218ENST00000597816 CEP170Q5SW79 1584 aa27.47■■□□□ 1.99
LTBP4-218ENST00000597816 ARAP1Q96P48 1450 aa27.46■■□□□ 1.99
LTBP4-218ENST00000597816 CARMIL1Q5VZK9 1371 aa27.39■■□□□ 1.98
LTBP4-218ENST00000597816 CUL7Q14999 1698 aa27.39■■□□□ 1.97
LTBP4-218ENST00000597816 JPH4Q96JJ6 628 aa27.35■■□□□ 1.97
LTBP4-218ENST00000597816 SHROOM2Q13796 1616 aa27.3■■□□□ 1.96
LTBP4-218ENST00000597816 RUSC2Q8N2Y8 1516 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms