RNA–Protein interactions for RNA: ENST00000356663.7

TMEM259-202, Transcript of transmembrane protein 259, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM259, Length 2,748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-202ENST00000356663 NISCHQ9Y2I1 1504 aa41.07■■■■■ 4.17
TMEM259-202ENST00000356663 HRCP23327 699 aa35.93■■■■□ 3.34
TMEM259-202ENST00000356663 SHROOM4Q9ULL8 1493 aa35.79■■■■□ 3.32
TMEM259-202ENST00000356663 SUPT5HO00267 1087 aaKnown RBP35.61■■■■□ 3.29
TMEM259-202ENST00000356663 MYO15BQ96JP2 1530 aa35.28■■■■□ 3.24
TMEM259-202ENST00000356663 PCGF6Q9BYE7 350 aa35.15■■■■□ 3.22
TMEM259-202ENST00000356663 CHIC1Q5VXU3 224 aa35.15■■■■□ 3.22
TMEM259-202ENST00000356663 ZCCHC6Q5VYS8 1495 aaKnown RBP34.96■■■■□ 3.19
TMEM259-202ENST00000356663 PPARGC1BQ86YN6 1023 aaKnown RBP34.93■■■■□ 3.18
TMEM259-202ENST00000356663 DCAF1Q9Y4B6 1507 aa34.75■■■■□ 3.15
TMEM259-202ENST00000356663 PELP1Q8IZL8 1130 aaKnown RBP34.53■■■■□ 3.12
TMEM259-202ENST00000356663 CCDC180Q9P1Z9 1646 aa34.44■■■■□ 3.1
TMEM259-202ENST00000356663 TRIM26Q12899 539 aaPredicted RBP34.27■■■■□ 3.08
TMEM259-202ENST00000356663 LOC105371045A0A1W2PR82 267 aa34.13■■■■□ 3.05
TMEM259-202ENST00000356663 ZEB1P37275 1124 aaPredicted RBP34.05■■■■□ 3.04
TMEM259-202ENST00000356663 DCAF8L2P0C7V8 631 aa33.76■■■■□ 3
TMEM259-202ENST00000356663 SCAF1Q9H7N4 1312 aaKnown RBP33.75■■■□□ 2.99
TMEM259-202ENST00000356663 ABCC9O60706 1549 aa33.21■■■□□ 2.91
TMEM259-202ENST00000356663 MYT1Q01538 1121 aa33.2■■■□□ 2.9
TMEM259-202ENST00000356663 TRIM41Q8WV44 630 aa33.11■■■□□ 2.89
TMEM259-202ENST00000356663 ACIN1Q9UKV3 1341 aaKnown RBP33.11■■■□□ 2.89
TMEM259-202ENST00000356663 RSF1Q96T23 1441 aaPredicted RBP32.92■■■□□ 2.86
TMEM259-202ENST00000356663 NEUROD1Q13562 356 aa32.92■■■□□ 2.86
TMEM259-202ENST00000356663 FAM9AQ8IZU1 332 aaPredicted RBP32.86■■■□□ 2.85
TMEM259-202ENST00000356663 CENPBP07199 599 aaPredicted RBP32.79■■■□□ 2.84
TMEM259-202ENST00000356663 RB1CC1Q8TDY2 1594 aa32.76■■■□□ 2.83
TMEM259-202ENST00000356663 GTF3C3Q9Y5Q9 886 aa32.73■■■□□ 2.83
TMEM259-202ENST00000356663 CCER1Q8TC90 406 aaPredicted RBP32.66■■■□□ 2.82
TMEM259-202ENST00000356663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.64■■■□□ 2.81
TMEM259-202ENST00000356663 DIEXFQ68CQ4 756 aaKnown RBP32.64■■■□□ 2.81
TMEM259-202ENST00000356663 EHMT2Q96KQ7 1210 aa32.53■■■□□ 2.8
TMEM259-202ENST00000356663 SCRIBQ14160 1630 aa32.46■■■□□ 2.79
TMEM259-202ENST00000356663 WRNQ14191 1432 aaPredicted RBP eCLIP32.14■■■□□ 2.745e-7■■■■■ 27.7
TMEM259-202ENST00000356663 ZNF316A6NFI3 1004 aaPredicted RBP32.11■■■□□ 2.73
TMEM259-202ENST00000356663 MROH2BQ7Z745 1585 aa31.98■■■□□ 2.71
TMEM259-202ENST00000356663 CECR2Q9BXF3 1484 aa31.96■■■□□ 2.71
TMEM259-202ENST00000356663 EIF4G1Q04637 1599 aaKnown RBP31.92■■■□□ 2.7
TMEM259-202ENST00000356663 YTHDC1Q96MU7 727 aaKnown RBP31.89■■■□□ 2.7
TMEM259-202ENST00000356663 WIZO95785 1651 aa31.89■■■□□ 2.7
TMEM259-202ENST00000356663 CEP162Q5TB80 1403 aa31.85■■■□□ 2.69
TMEM259-202ENST00000356663 BAZ1AQ9NRL2 1556 aaPredicted RBP31.8■■■□□ 2.68
TMEM259-202ENST00000356663 TTBK1Q5TCY1 1321 aaPredicted RBP31.79■■■□□ 2.68
TMEM259-202ENST00000356663 MIER1Q8N108 512 aa31.76■■■□□ 2.67
TMEM259-202ENST00000356663 TNIKQ9UKE5 1360 aa31.73■■■□□ 2.67
TMEM259-202ENST00000356663 CCDC88BA6NC98 1476 aa31.61■■■□□ 2.65
TMEM259-202ENST00000356663 NACADO15069 1562 aa31.59■■■□□ 2.65
TMEM259-202ENST00000356663 ABCC8Q09428 1581 aa31.56■■■□□ 2.64
TMEM259-202ENST00000356663 EEA1Q15075 1411 aa31.54■■■□□ 2.64
TMEM259-202ENST00000356663 CLSPNQ9HAW4 1339 aa31.53■■■□□ 2.64
TMEM259-202ENST00000356663 SOGA1O94964 1423 aa31.46■■■□□ 2.63
TMEM259-202ENST00000356663 CSRNP3Q8WYN3 585 aa31.41■■■□□ 2.62
TMEM259-202ENST00000356663 TOP2AP11388 1531 aaKnown RBP31.39■■■□□ 2.62
TMEM259-202ENST00000356663 UBTFP17480 764 aaKnown RBP31.39■■■□□ 2.62
TMEM259-202ENST00000356663 GOLGA3Q08378 1498 aa31.36■■■□□ 2.61
TMEM259-202ENST00000356663 HNRNPUL2Q1KMD3 747 aaKnown RBP31.31■■■□□ 2.6
TMEM259-202ENST00000356663 SUPT16HQ9Y5B9 1047 aaKnown RBP31.27■■■□□ 2.6
TMEM259-202ENST00000356663 SMARCA2P51531 1590 aa31.26■■■□□ 2.59
TMEM259-202ENST00000356663 RUSC2Q8N2Y8 1516 aa31.24■■■□□ 2.59
TMEM259-202ENST00000356663 ANP32EQ9BTT0 268 aa31.09■■■□□ 2.57
TMEM259-202ENST00000356663 SMARCA4P51532 1647 aa31.08■■■□□ 2.57
TMEM259-202ENST00000356663 CEP164Q9UPV0 1460 aa31.07■■■□□ 2.56
TMEM259-202ENST00000356663 TSHZ2Q9NRE2 1034 aa31.06■■■□□ 2.56
TMEM259-202ENST00000356663 KIF21BO75037 1637 aa31.05■■■□□ 2.56
TMEM259-202ENST00000356663 VPS8Q8N3P4 1428 aa31.05■■■□□ 2.56
TMEM259-202ENST00000356663 CLIP1P30622 1438 aa31.04■■■□□ 2.56
TMEM259-202ENST00000356663 APLP2Q06481 763 aa30.97■■■□□ 2.55
TMEM259-202ENST00000356663 DHX57Q6P158 1386 aaKnown RBP30.89■■■□□ 2.54
TMEM259-202ENST00000356663 BAZ1BQ9UIG0 1483 aaKnown RBP30.88■■■□□ 2.53
TMEM259-202ENST00000356663 BCL11AQ9H165 835 aa30.77■■■□□ 2.52
TMEM259-202ENST00000356663 SYNJ1O43426 1573 aa30.71■■■□□ 2.51
TMEM259-202ENST00000356663 RAPGEF2Q9Y4G8 1499 aa30.66■■■□□ 2.5
TMEM259-202ENST00000356663 CUX2O14529 1486 aa30.52■■■□□ 2.48
TMEM259-202ENST00000356663 RRBP1Q9P2E9 1410 aaKnown RBP30.49■■■□□ 2.47
TMEM259-202ENST00000356663 UNC13AQ9UPW8 1703 aa30.46■■■□□ 2.47
TMEM259-202ENST00000356663 BCANQ96GW7 911 aa30.45■■■□□ 2.47
TMEM259-202ENST00000356663 FKBP8Q14318 412 aa30.45■■■□□ 2.46
TMEM259-202ENST00000356663 KCNH8Q96L42 1107 aa30.45■■■□□ 2.46
TMEM259-202ENST00000356663 RANGAP1P46060 587 aaPredicted RBP30.44■■■□□ 2.46
TMEM259-202ENST00000356663 PEG3Q9GZU2 1588 aa30.42■■■□□ 2.46
TMEM259-202ENST00000356663 ARAP1Q96P48 1450 aa30.39■■■□□ 2.46
TMEM259-202ENST00000356663 PABPN1Q86U42 306 aaKnown RBP eCLIP30.37■■■□□ 2.451e-9■■□□□ 14
TMEM259-202ENST00000356663 ERICH3Q5RHP9 1530 aa30.36■■■□□ 2.45
TMEM259-202ENST00000356663 KANK4Q5T7N3 995 aaPredicted RBP30.36■■■□□ 2.45
TMEM259-202ENST00000356663 RBM19Q9Y4C8 960 aaKnown RBP30.36■■■□□ 2.45
TMEM259-202ENST00000356663 NEFLP07196 543 aa30.32■■■□□ 2.44
TMEM259-202ENST00000356663 CCNB3Q8WWL7 1395 aa30.3■■■□□ 2.44
TMEM259-202ENST00000356663 TOP2BQ02880 1626 aa30.26■■■□□ 2.43
TMEM259-202ENST00000356663 PRXQ9BXM0 1461 aa30.24■■■□□ 2.43
TMEM259-202ENST00000356663 MAPKBP1O60336 1514 aa30.22■■■□□ 2.43
TMEM259-202ENST00000356663 DDX10Q13206 875 aaKnown RBP30.16■■■□□ 2.42
TMEM259-202ENST00000356663 RAB3GAP2Q9H2M9 1393 aa30.16■■■□□ 2.42
TMEM259-202ENST00000356663 CCER2I3L3R5 266 aa30.13■■■□□ 2.41
TMEM259-202ENST00000356663 BIVM-ERCC5R4GMW8 1640 aa30.13■■■□□ 2.41
TMEM259-202ENST00000356663 PPP1R15AO75807 674 aaPredicted RBP30.1■■■□□ 2.41
TMEM259-202ENST00000356663 WDR97A6NE52 1622 aa30.09■■■□□ 2.41
TMEM259-202ENST00000356663 ITGAEP38570 1179 aa30.06■■■□□ 2.4
TMEM259-202ENST00000356663 SETD5Q9C0A6 1442 aa30.01■■■□□ 2.39
TMEM259-202ENST00000356663 ATAD2BQ9ULI0 1458 aa30.01■■■□□ 2.39
TMEM259-202ENST00000356663 MSH5O43196 834 aa30.01■■■□□ 2.39
TMEM259-202ENST00000356663 TIMELESSQ9UNS1 1208 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms