RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 NISCHQ9Y2I1 1504 aa26.78■■□□□ 1.88
H3F3B-201ENST00000254810 SHROOM4Q9ULL8 1493 aa23.35■■□□□ 1.33
H3F3B-201ENST00000254810 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
H3F3B-201ENST00000254810 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
H3F3B-201ENST00000254810 MYO15BQ96JP2 1530 aa22.69■■□□□ 1.22
H3F3B-201ENST00000254810 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
H3F3B-201ENST00000254810 HRCP23327 699 aa22.51■■□□□ 1.19
H3F3B-201ENST00000254810 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
H3F3B-201ENST00000254810 PCGF6Q9BYE7 350 aa22.3■■□□□ 1.16
H3F3B-201ENST00000254810 DCAF8L2P0C7V8 631 aa22.24■■□□□ 1.15
H3F3B-201ENST00000254810 PPARGC1BQ86YN6 1023 aaKnown RBP22.18■■□□□ 1.14
H3F3B-201ENST00000254810 LOC105371045A0A1W2PR82 267 aa22■■□□□ 1.11
H3F3B-201ENST00000254810 DCAF1Q9Y4B6 1507 aa21.95■■□□□ 1.1
H3F3B-201ENST00000254810 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.06
H3F3B-201ENST00000254810 ABCC9O60706 1549 aa21.53■■□□□ 1.04
H3F3B-201ENST00000254810 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
H3F3B-201ENST00000254810 SCRIBQ14160 1630 aa21.33■■□□□ 1
H3F3B-201ENST00000254810 TRIM41Q8WV44 630 aa21.31■■□□□ 1
H3F3B-201ENST00000254810 FAM9AQ8IZU1 332 aaPredicted RBP21.31■■□□□ 1
H3F3B-201ENST00000254810 RB1CC1Q8TDY2 1594 aa21.3■■□□□ 1
H3F3B-201ENST00000254810 ZEB1P37275 1124 aaPredicted RBP21.22■□□□□ 0.99
H3F3B-201ENST00000254810 EHMT2Q96KQ7 1210 aa21.22■□□□□ 0.99
H3F3B-201ENST00000254810 SCAF1Q9H7N4 1312 aaKnown RBP21.1■□□□□ 0.97
H3F3B-201ENST00000254810 CECR2Q9BXF3 1484 aa21■□□□□ 0.95
H3F3B-201ENST00000254810 MROH2BQ7Z745 1585 aa20.93■□□□□ 0.94
H3F3B-201ENST00000254810 WIZO95785 1651 aa20.85■□□□□ 0.93
H3F3B-201ENST00000254810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.85■□□□□ 0.93
H3F3B-201ENST00000254810 PELP1Q8IZL8 1130 aaKnown RBP20.82■□□□□ 0.92
H3F3B-201ENST00000254810 EIF4G1Q04637 1599 aaKnown RBP20.71■□□□□ 0.91
H3F3B-201ENST00000254810 CCER1Q8TC90 406 aaPredicted RBP20.71■□□□□ 0.91
H3F3B-201ENST00000254810 NEUROD1Q13562 356 aa20.68■□□□□ 0.9
H3F3B-201ENST00000254810 NACADO15069 1562 aa20.68■□□□□ 0.9
H3F3B-201ENST00000254810 ACIN1Q9UKV3 1341 aaKnown RBP20.65■□□□□ 0.9
H3F3B-201ENST00000254810 BAZ1AQ9NRL2 1556 aaPredicted RBP20.64■□□□□ 0.9
H3F3B-201ENST00000254810 TTBK1Q5TCY1 1321 aaPredicted RBP20.63■□□□□ 0.89
H3F3B-201ENST00000254810 ABCC8Q09428 1581 aa20.57■□□□□ 0.88
H3F3B-201ENST00000254810 CCDC88BA6NC98 1476 aa20.55■□□□□ 0.88
H3F3B-201ENST00000254810 DIEXFQ68CQ4 756 aaKnown RBP20.54■□□□□ 0.88
H3F3B-201ENST00000254810 WRNQ14191 1432 aaPredicted RBP eCLIP20.49■□□□□ 0.877e-8■□□□□ 11.3
H3F3B-201ENST00000254810 CEP162Q5TB80 1403 aa20.48■□□□□ 0.87
H3F3B-201ENST00000254810 GTF3C3Q9Y5Q9 886 aa20.47■□□□□ 0.87
H3F3B-201ENST00000254810 SOGA1O94964 1423 aa20.45■□□□□ 0.87
H3F3B-201ENST00000254810 TOP2AP11388 1531 aaKnown RBP20.41■□□□□ 0.86
H3F3B-201ENST00000254810 RUSC2Q8N2Y8 1516 aa20.38■□□□□ 0.85
H3F3B-201ENST00000254810 SMARCA2P51531 1590 aa20.37■□□□□ 0.85
H3F3B-201ENST00000254810 TNIKQ9UKE5 1360 aa20.34■□□□□ 0.85
H3F3B-201ENST00000254810 CENPBP07199 599 aaPredicted RBP20.33■□□□□ 0.85
H3F3B-201ENST00000254810 SMARCA4P51532 1647 aa20.31■□□□□ 0.84
H3F3B-201ENST00000254810 CSRNP3Q8WYN3 585 aa20.26■□□□□ 0.83
H3F3B-201ENST00000254810 ZNF316A6NFI3 1004 aaPredicted RBP20.25■□□□□ 0.83
H3F3B-201ENST00000254810 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
H3F3B-201ENST00000254810 YTHDC1Q96MU7 727 aaKnown RBP20.19■□□□□ 0.82
H3F3B-201ENST00000254810 EEA1Q15075 1411 aa20.16■□□□□ 0.82
H3F3B-201ENST00000254810 GOLGA3Q08378 1498 aa20.15■□□□□ 0.82
H3F3B-201ENST00000254810 UNC13AQ9UPW8 1703 aa20.13■□□□□ 0.81
H3F3B-201ENST00000254810 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
H3F3B-201ENST00000254810 MIER1Q8N108 512 aa20.12■□□□□ 0.81
H3F3B-201ENST00000254810 SYNJ1O43426 1573 aa20.02■□□□□ 0.8
H3F3B-201ENST00000254810 CLIP1P30622 1438 aa19.98■□□□□ 0.79
H3F3B-201ENST00000254810 CEP164Q9UPV0 1460 aa19.97■□□□□ 0.79
H3F3B-201ENST00000254810 KIF21BO75037 1637 aa19.96■□□□□ 0.79
H3F3B-201ENST00000254810 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
H3F3B-201ENST00000254810 VPS8Q8N3P4 1428 aa19.93■□□□□ 0.78
H3F3B-201ENST00000254810 RANGAP1P46060 587 aaPredicted RBP19.9■□□□□ 0.78
H3F3B-201ENST00000254810 RAPGEF2Q9Y4G8 1499 aa19.9■□□□□ 0.78
H3F3B-201ENST00000254810 BICRAQ9NZM4 1560 aa19.86■□□□□ 0.77
H3F3B-201ENST00000254810 PEG3Q9GZU2 1588 aa19.83■□□□□ 0.77
H3F3B-201ENST00000254810 BAZ1BQ9UIG0 1483 aaKnown RBP19.8■□□□□ 0.76
H3F3B-201ENST00000254810 MYT1Q01538 1121 aa19.78■□□□□ 0.76
H3F3B-201ENST00000254810 APLP2Q06481 763 aa19.78■□□□□ 0.76
H3F3B-201ENST00000254810 DHX57Q6P158 1386 aaKnown RBP19.75■□□□□ 0.75
H3F3B-201ENST00000254810 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
H3F3B-201ENST00000254810 KANK4Q5T7N3 995 aaPredicted RBP19.68■□□□□ 0.74
H3F3B-201ENST00000254810 ARAP1Q96P48 1450 aa19.66■□□□□ 0.74
H3F3B-201ENST00000254810 TOP2BQ02880 1626 aa19.64■□□□□ 0.73
H3F3B-201ENST00000254810 SUPT16HQ9Y5B9 1047 aaKnown RBP19.61■□□□□ 0.73
H3F3B-201ENST00000254810 CLSPNQ9HAW4 1339 aa19.6■□□□□ 0.73
H3F3B-201ENST00000254810 PRXQ9BXM0 1461 aa19.58■□□□□ 0.73
H3F3B-201ENST00000254810 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
H3F3B-201ENST00000254810 ERICH3Q5RHP9 1530 aa19.54■□□□□ 0.72
H3F3B-201ENST00000254810 RRBP1Q9P2E9 1410 aaKnown RBP19.53■□□□□ 0.72
H3F3B-201ENST00000254810 KCNH8Q96L42 1107 aa19.5■□□□□ 0.71
H3F3B-201ENST00000254810 CUX2O14529 1486 aa19.46■□□□□ 0.71
H3F3B-201ENST00000254810 ITGAEP38570 1179 aa19.45■□□□□ 0.7
H3F3B-201ENST00000254810 CUX1P39880 1505 aa19.44■□□□□ 0.7
H3F3B-201ENST00000254810 CCNB3Q8WWL7 1395 aa19.43■□□□□ 0.7
H3F3B-201ENST00000254810 TSHZ2Q9NRE2 1034 aa19.42■□□□□ 0.7
H3F3B-201ENST00000254810 ARHGAP35Q9NRY4 1499 aa19.41■□□□□ 0.7
H3F3B-201ENST00000254810 MAPKBP1O60336 1514 aa19.38■□□□□ 0.69
H3F3B-201ENST00000254810 RAB3GAP2Q9H2M9 1393 aa19.36■□□□□ 0.69
H3F3B-201ENST00000254810 KIF27Q86VH2 1401 aa19.35■□□□□ 0.69
H3F3B-201ENST00000254810 BCANQ96GW7 911 aa19.27■□□□□ 0.67
H3F3B-201ENST00000254810 SIN3AQ96ST3 1273 aa19.26■□□□□ 0.67
H3F3B-201ENST00000254810 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
H3F3B-201ENST00000254810 DDX10Q13206 875 aaKnown RBP19.24■□□□□ 0.67
H3F3B-201ENST00000254810 TIAM1Q13009 1591 aa19.23■□□□□ 0.67
H3F3B-201ENST00000254810 PHLDB1Q86UU1 1377 aa19.22■□□□□ 0.67
H3F3B-201ENST00000254810 SETD5Q9C0A6 1442 aa19.2■□□□□ 0.66
H3F3B-201ENST00000254810 CFTRP13569 1480 aa19.19■□□□□ 0.66
H3F3B-201ENST00000254810 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms