RNA–Protein interactions for RNA: ENST00000333175.9

TMEM259-201, Transcript of transmembrane protein 259, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM259, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-201ENST00000333175 NISCHQ9Y2I1 1504 aa46.81■■■■■ 5.08
TMEM259-201ENST00000333175 CCDC180Q9P1Z9 1646 aa39.95■■■■□ 3.99
TMEM259-201ENST00000333175 SHROOM4Q9ULL8 1493 aa39.78■■■■□ 3.96
TMEM259-201ENST00000333175 ZCCHC6Q5VYS8 1495 aaKnown RBP39.52■■■■□ 3.92
TMEM259-201ENST00000333175 DCAF8L2P0C7V8 631 aa39.04■■■■□ 3.84
TMEM259-201ENST00000333175 SUPT5HO00267 1087 aaKnown RBP38.8■■■■□ 3.8
TMEM259-201ENST00000333175 DCAF1Q9Y4B6 1507 aa38.33■■■■□ 3.73
TMEM259-201ENST00000333175 SCRIBQ14160 1630 aa37.5■■■■□ 3.59
TMEM259-201ENST00000333175 CHIC1Q5VXU3 224 aa37.47■■■■□ 3.59
TMEM259-201ENST00000333175 ABCC9O60706 1549 aa37.44■■■■□ 3.58
TMEM259-201ENST00000333175 MYO15BQ96JP2 1530 aa37.33■■■■□ 3.57
TMEM259-201ENST00000333175 NACADO15069 1562 aa37.01■■■■□ 3.52
TMEM259-201ENST00000333175 RSF1Q96T23 1441 aaPredicted RBP36.91■■■■□ 3.5
TMEM259-201ENST00000333175 CECR2Q9BXF3 1484 aa36.6■■■■□ 3.45
TMEM259-201ENST00000333175 RB1CC1Q8TDY2 1594 aa36.54■■■■□ 3.44
TMEM259-201ENST00000333175 MROH2BQ7Z745 1585 aa36.42■■■■□ 3.42
TMEM259-201ENST00000333175 LOC105371045A0A1W2PR82 267 aa36.41■■■■□ 3.42
TMEM259-201ENST00000333175 WIZO95785 1651 aa36.22■■■■□ 3.39
TMEM259-201ENST00000333175 TRIM41Q8WV44 630 aa36.11■■■■□ 3.37
TMEM259-201ENST00000333175 UNC13AQ9UPW8 1703 aa36.03■■■■□ 3.36
TMEM259-201ENST00000333175 PCGF6Q9BYE7 350 aa35.97■■■■□ 3.35
TMEM259-201ENST00000333175 BAZ1AQ9NRL2 1556 aaPredicted RBP35.97■■■■□ 3.35
TMEM259-201ENST00000333175 FAM9AQ8IZU1 332 aaPredicted RBP35.89■■■■□ 3.34
TMEM259-201ENST00000333175 SMARCA4P51532 1647 aa35.75■■■■□ 3.31
TMEM259-201ENST00000333175 PABPN1Q86U42 306 aaKnown RBP eCLIP35.75■■■■□ 3.311e-9■■□□□ 14
TMEM259-201ENST00000333175 EHMT2Q96KQ7 1210 aa35.68■■■■□ 3.3
TMEM259-201ENST00000333175 HRCP23327 699 aa35.64■■■■□ 3.3
TMEM259-201ENST00000333175 TOP2AP11388 1531 aaKnown RBP35.6■■■■□ 3.29
TMEM259-201ENST00000333175 BICRAQ9NZM4 1560 aa35.57■■■■□ 3.28
TMEM259-201ENST00000333175 EIF4G1Q04637 1599 aaKnown RBP35.53■■■■□ 3.28
TMEM259-201ENST00000333175 CCDC88BA6NC98 1476 aa35.46■■■■□ 3.27
TMEM259-201ENST00000333175 SMARCA2P51531 1590 aa35.41■■■■□ 3.26
TMEM259-201ENST00000333175 ABCC8Q09428 1581 aa35.31■■■■□ 3.24
TMEM259-201ENST00000333175 TRIM26Q12899 539 aaPredicted RBP35.29■■■■□ 3.24
TMEM259-201ENST00000333175 PPARGC1BQ86YN6 1023 aaKnown RBP35.09■■■■□ 3.21
TMEM259-201ENST00000333175 PEG3Q9GZU2 1588 aa35.01■■■■□ 3.2
TMEM259-201ENST00000333175 ATAD2BQ9ULI0 1458 aa34.91■■■■□ 3.18
TMEM259-201ENST00000333175 SOGA1O94964 1423 aa34.87■■■■□ 3.17
TMEM259-201ENST00000333175 BAZ1BQ9UIG0 1483 aaKnown RBP34.82■■■■□ 3.16
TMEM259-201ENST00000333175 RUSC2Q8N2Y8 1516 aa34.74■■■■□ 3.15
TMEM259-201ENST00000333175 WRNQ14191 1432 aaPredicted RBP eCLIP34.69■■■■□ 3.145e-7■■■■■ 27.7
TMEM259-201ENST00000333175 CSRNP3Q8WYN3 585 aa34.59■■■■□ 3.13
TMEM259-201ENST00000333175 SYNJ1O43426 1573 aa34.58■■■■□ 3.13
TMEM259-201ENST00000333175 CEP162Q5TB80 1403 aa34.52■■■■□ 3.12
TMEM259-201ENST00000333175 EEA1Q15075 1411 aa34.51■■■■□ 3.12
TMEM259-201ENST00000333175 UBTFP17480 764 aaKnown RBP34.48■■■■□ 3.11
TMEM259-201ENST00000333175 TNIKQ9UKE5 1360 aa34.43■■■■□ 3.1
TMEM259-201ENST00000333175 TTBK1Q5TCY1 1321 aaPredicted RBP34.42■■■■□ 3.1
TMEM259-201ENST00000333175 GOLGA3Q08378 1498 aa34.33■■■■□ 3.09
TMEM259-201ENST00000333175 ZEB1P37275 1124 aaPredicted RBP34.27■■■■□ 3.08
TMEM259-201ENST00000333175 NCAPD3P42695 1498 aa34.25■■■■□ 3.07
TMEM259-201ENST00000333175 HMGXB3Q12766 1538 aa34.23■■■■□ 3.07
TMEM259-201ENST00000333175 CEP164Q9UPV0 1460 aa34.17■■■■□ 3.06
TMEM259-201ENST00000333175 TOP2BQ02880 1626 aa34.13■■■■□ 3.05
TMEM259-201ENST00000333175 KIF21BO75037 1637 aa34.12■■■■□ 3.05
TMEM259-201ENST00000333175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.08■■■■□ 3.05
TMEM259-201ENST00000333175 RAPGEF2Q9Y4G8 1499 aa34.04■■■■□ 3.04
TMEM259-201ENST00000333175 BIVM-ERCC5R4GMW8 1640 aa34.01■■■■□ 3.03
TMEM259-201ENST00000333175 RANGAP1P46060 587 aaPredicted RBP34■■■■□ 3.03
TMEM259-201ENST00000333175 CLIP1P30622 1438 aa33.95■■■■□ 3.03
TMEM259-201ENST00000333175 CUX1P39880 1505 aa33.93■■■■□ 3.02
TMEM259-201ENST00000333175 CCER1Q8TC90 406 aaPredicted RBP33.92■■■■□ 3.02
TMEM259-201ENST00000333175 CFTRP13569 1480 aa33.9■■■■□ 3.02
TMEM259-201ENST00000333175 VPS8Q8N3P4 1428 aa33.73■■■□□ 2.99
TMEM259-201ENST00000333175 PRXQ9BXM0 1461 aa33.68■■■□□ 2.98
TMEM259-201ENST00000333175 CC2D2AQ9P2K1 1620 aa33.67■■■□□ 2.98
TMEM259-201ENST00000333175 KIF27Q86VH2 1401 aa33.64■■■□□ 2.98
TMEM259-201ENST00000333175 ERICH3Q5RHP9 1530 aa33.62■■■□□ 2.97
TMEM259-201ENST00000333175 PRDM2Q13029 1718 aa33.62■■■□□ 2.97
TMEM259-201ENST00000333175 CADPSQ9ULU8 1353 aa33.6■■■□□ 2.97
TMEM259-201ENST00000333175 APLP2Q06481 763 aa33.58■■■□□ 2.97
TMEM259-201ENST00000333175 HNRNPUL2Q1KMD3 747 aaKnown RBP33.52■■■□□ 2.96
TMEM259-201ENST00000333175 ARAP1Q96P48 1450 aa33.46■■■□□ 2.95
TMEM259-201ENST00000333175 CUX2O14529 1486 aa33.45■■■□□ 2.95
TMEM259-201ENST00000333175 FGD5Q6ZNL6 1462 aa33.38■■■□□ 2.93
TMEM259-201ENST00000333175 FANCD2Q9BXW9 1451 aa33.32■■■□□ 2.92
TMEM259-201ENST00000333175 IGF1RP08069 1367 aa33.31■■■□□ 2.92
TMEM259-201ENST00000333175 NESP48681 1621 aa33.26■■■□□ 2.92
TMEM259-201ENST00000333175 KANK4Q5T7N3 995 aaPredicted RBP33.25■■■□□ 2.91
TMEM259-201ENST00000333175 ARHGAP35Q9NRY4 1499 aa33.23■■■□□ 2.91
TMEM259-201ENST00000333175 CARMIL1Q5VZK9 1371 aa33.18■■■□□ 2.9
TMEM259-201ENST00000333175 RAD54L2Q9Y4B4 1467 aa33.12■■■□□ 2.89
TMEM259-201ENST00000333175 DNMBPQ6XZF7 1577 aa33.07■■■□□ 2.88
TMEM259-201ENST00000333175 TOPBP1Q92547 1522 aa33.06■■■□□ 2.88
TMEM259-201ENST00000333175 POLA1P09884 1462 aaPredicted RBP33.03■■■□□ 2.88
TMEM259-201ENST00000333175 DNAJC5BQ9UF47 199 aa33.02■■■□□ 2.88
TMEM259-201ENST00000333175 DIEXFQ68CQ4 756 aaKnown RBP33■■■□□ 2.87
TMEM259-201ENST00000333175 ABCA10Q8WWZ4 1543 aa32.93■■■□□ 2.86
TMEM259-201ENST00000333175 P3H3Q8IVL6 736 aa32.93■■■□□ 2.86
TMEM259-201ENST00000333175 URB2Q14146 1524 aaKnown RBP32.87■■■□□ 2.85
TMEM259-201ENST00000333175 RRBP1Q9P2E9 1410 aaKnown RBP32.86■■■□□ 2.85
TMEM259-201ENST00000333175 LAMC3Q9Y6N6 1575 aa32.86■■■□□ 2.85
TMEM259-201ENST00000333175 ZNF316A6NFI3 1004 aaPredicted RBP32.83■■■□□ 2.85
TMEM259-201ENST00000333175 ITGAEP38570 1179 aa32.82■■■□□ 2.84
TMEM259-201ENST00000333175 CCNB3Q8WWL7 1395 aa32.79■■■□□ 2.84
TMEM259-201ENST00000333175 TIAM1Q13009 1591 aa32.78■■■□□ 2.84
TMEM259-201ENST00000333175 ATP1B4Q9UN42 357 aaPredicted RBP32.77■■■□□ 2.84
TMEM259-201ENST00000333175 FHOD3Q2V2M9 1422 aa32.74■■■□□ 2.83
TMEM259-201ENST00000333175 DHX57Q6P158 1386 aaKnown RBP32.74■■■□□ 2.83
TMEM259-201ENST00000333175 TDRD9Q8NDG6 1382 aaKnown RBP32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms