RNA–Protein interactions for RNA: ENST00000275820.3

NOM1-201, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOM1, Length 6,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-201ENST00000275820 DCAF8L2P0C7V8 631 aa32.35■■■□□ 2.77
NOM1-201ENST00000275820 NISCHQ9Y2I1 1504 aa31.46■■■□□ 2.63
NOM1-201ENST00000275820 SUPT5HO00267 1087 aaKnown RBP31.16■■■□□ 2.58
NOM1-201ENST00000275820 SHROOM4Q9ULL8 1493 aa30.63■■■□□ 2.49
NOM1-201ENST00000275820 EHMT2Q96KQ7 1210 aa30.04■■■□□ 2.4
NOM1-201ENST00000275820 PELP1Q8IZL8 1130 aaKnown RBP29.45■■■□□ 2.3
NOM1-201ENST00000275820 APLP2Q06481 763 aa29.38■■■□□ 2.29
NOM1-201ENST00000275820 PCGF6Q9BYE7 350 aa29.37■■■□□ 2.29
NOM1-201ENST00000275820 FAM9AQ8IZU1 332 aaPredicted RBP29.35■■■□□ 2.29
NOM1-201ENST00000275820 TTBK1Q5TCY1 1321 aaPredicted RBP29.09■■■□□ 2.25
NOM1-201ENST00000275820 TRIM41Q8WV44 630 aa28.84■■■□□ 2.21
NOM1-201ENST00000275820 ZEB1P37275 1124 aaPredicted RBP28.84■■■□□ 2.21
NOM1-201ENST00000275820 CENPBP07199 599 aaPredicted RBP28.71■■■□□ 2.19
NOM1-201ENST00000275820 CCER1Q8TC90 406 aaPredicted RBP28.7■■■□□ 2.18
NOM1-201ENST00000275820 RANGAP1P46060 587 aaPredicted RBP28.64■■■□□ 2.17
NOM1-201ENST00000275820 UBTFP17480 764 aaKnown RBP28.4■■■□□ 2.14
NOM1-201ENST00000275820 ATP1B4Q9UN42 357 aaPredicted RBP28.28■■■□□ 2.12
NOM1-201ENST00000275820 ERICH6Q7L0X2 663 aa28.23■■■□□ 2.11
NOM1-201ENST00000275820 PPARGC1BQ86YN6 1023 aaKnown RBP28.15■■■□□ 2.1
NOM1-201ENST00000275820 TRIM26Q12899 539 aaPredicted RBP28.14■■■□□ 2.1
NOM1-201ENST00000275820 YTHDC1Q96MU7 727 aaKnown RBP28.13■■■□□ 2.09
NOM1-201ENST00000275820 HRCP23327 699 aa28.04■■■□□ 2.08
NOM1-201ENST00000275820 NEFLP07196 543 aa27.95■■■□□ 2.06
NOM1-201ENST00000275820 CHIC1Q5VXU3 224 aa27.87■■■□□ 2.05
NOM1-201ENST00000275820 LOC105371045A0A1W2PR82 267 aa27.85■■■□□ 2.05
NOM1-201ENST00000275820 MYT1Q01538 1121 aa27.69■■■□□ 2.02
NOM1-201ENST00000275820 ITGAEP38570 1179 aa27.53■■■□□ 2
NOM1-201ENST00000275820 HNRNPUL2Q1KMD3 747 aaKnown RBP27.48■■□□□ 1.99
NOM1-201ENST00000275820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.29■■□□□ 1.96
NOM1-201ENST00000275820 POLR3GLQ9BT43 218 aa27.21■■□□□ 1.95
NOM1-201ENST00000275820 DIEXFQ68CQ4 756 aaKnown RBP27.17■■□□□ 1.94
NOM1-201ENST00000275820 DAXXQ9UER7 740 aaPredicted RBP27■■□□□ 1.91
NOM1-201ENST00000275820 CNGB1Q14028 1251 aaPredicted RBP26.99■■□□□ 1.91
NOM1-201ENST00000275820 MYT1LQ9UL68 1186 aa26.96■■□□□ 1.91
NOM1-201ENST00000275820 FAM50AQ14320 339 aaKnown RBP26.84■■□□□ 1.89
NOM1-201ENST00000275820 ABCC9O60706 1549 aa26.74■■□□□ 1.87
NOM1-201ENST00000275820 PABPN1Q86U42 306 aaKnown RBP eCLIP26.7■■□□□ 1.86
NOM1-201ENST00000275820 GTF3C3Q9Y5Q9 886 aa26.69■■□□□ 1.86
NOM1-201ENST00000275820 NEUROD1Q13562 356 aa26.68■■□□□ 1.86
NOM1-201ENST00000275820 TRIM52Q96A61 297 aa26.63■■□□□ 1.85
NOM1-201ENST00000275820 ZNF316A6NFI3 1004 aaPredicted RBP26.55■■□□□ 1.84
NOM1-201ENST00000275820 BCANQ96GW7 911 aa26.53■■□□□ 1.84
NOM1-201ENST00000275820 SLC4A1APQ9BWU0 796 aaKnown RBP26.53■■□□□ 1.84
NOM1-201ENST00000275820 RTL5Q5HYW3 569 aaPredicted RBP26.53■■□□□ 1.84
NOM1-201ENST00000275820 ANP32CO43423 234 aa26.48■■□□□ 1.83
NOM1-201ENST00000275820 CLSPNQ9HAW4 1339 aa26.45■■□□□ 1.82
NOM1-201ENST00000275820 ACIN1Q9UKV3 1341 aaKnown RBP26.36■■□□□ 1.81
NOM1-201ENST00000275820 CSRNP3Q8WYN3 585 aa26.36■■□□□ 1.81
NOM1-201ENST00000275820 ZNF326Q5BKZ1 582 aaKnown RBP26.32■■□□□ 1.8
NOM1-201ENST00000275820 CDK11AQ9UQ88 783 aaPredicted RBP26.27■■□□□ 1.8
NOM1-201ENST00000275820 DCAF1Q9Y4B6 1507 aa26.18■■□□□ 1.78
NOM1-201ENST00000275820 P3H3Q8IVL6 736 aa26.17■■□□□ 1.78
NOM1-201ENST00000275820 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
NOM1-201ENST00000275820 FBLN2P98095 1184 aa26.04■■□□□ 1.76
NOM1-201ENST00000275820 SCRIBQ14160 1630 aa26.02■■□□□ 1.76
NOM1-201ENST00000275820 ARID3CA6NKF2 412 aa26■■□□□ 1.75
NOM1-201ENST00000275820 CANXP27824 592 aaKnown RBP25.87■■□□□ 1.73
NOM1-201ENST00000275820 ZNF777Q9ULD5 760 aaPredicted RBP25.84■■□□□ 1.73
NOM1-201ENST00000275820 FKBP8Q14318 412 aa25.84■■□□□ 1.73
NOM1-201ENST00000275820 TONSLQ96HA7 1378 aa25.83■■□□□ 1.73
NOM1-201ENST00000275820 ZBTB47Q9UFB7 747 aaPredicted RBP25.83■■□□□ 1.73
NOM1-201ENST00000275820 ANP32AP39687 249 aaKnown RBP25.81■■□□□ 1.72
NOM1-201ENST00000275820 DDX10Q13206 875 aaKnown RBP25.76■■□□□ 1.71
NOM1-201ENST00000275820 HNRNPUQ00839 825 aaKnown RBP eCLIP25.71■■□□□ 1.71
NOM1-201ENST00000275820 NPM2Q86SE8 214 aaKnown RBP25.68■■□□□ 1.7
NOM1-201ENST00000275820 BCL11AQ9H165 835 aa25.66■■□□□ 1.7
NOM1-201ENST00000275820 MYO15BQ96JP2 1530 aa25.65■■□□□ 1.7
NOM1-201ENST00000275820 NEFMP07197 916 aa25.65■■□□□ 1.7
NOM1-201ENST00000275820 FAM9BQ8IZU0 186 aa25.62■■□□□ 1.69
NOM1-201ENST00000275820 SCAF1Q9H7N4 1312 aaKnown RBP25.58■■□□□ 1.69
NOM1-201ENST00000275820 CCDC180Q9P1Z9 1646 aa25.57■■□□□ 1.68
NOM1-201ENST00000275820 MIER1Q8N108 512 aa25.55■■□□□ 1.68
NOM1-201ENST00000275820 SLC24A1O60721 1099 aa25.55■■□□□ 1.68
NOM1-201ENST00000275820 CHIC2Q9UKJ5 165 aa25.52■■□□□ 1.68
NOM1-201ENST00000275820 CLIP1P30622 1438 aa25.5■■□□□ 1.67
NOM1-201ENST00000275820 SALL2Q9Y467 1007 aaPredicted RBP25.42■■□□□ 1.66
NOM1-201ENST00000275820 TMC1Q8TDI8 760 aa25.4■■□□□ 1.66
NOM1-201ENST00000275820 CCDC136Q96JN2 1154 aa25.38■■□□□ 1.65
NOM1-201ENST00000275820 MRS2Q9HD23 443 aa25.37■■□□□ 1.65
NOM1-201ENST00000275820 MTUS2Q5JR59 1369 aa25.37■■□□□ 1.65
NOM1-201ENST00000275820 CEP162Q5TB80 1403 aa25.37■■□□□ 1.65
NOM1-201ENST00000275820 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
NOM1-201ENST00000275820 CHGAP10645 457 aaKnown RBP25.36■■□□□ 1.65
NOM1-201ENST00000275820 HIRIP3Q9BW71 556 aaPredicted RBP25.35■■□□□ 1.65
NOM1-201ENST00000275820 GOLGA3Q08378 1498 aa25.33■■□□□ 1.64
NOM1-201ENST00000275820 EEA1Q15075 1411 aa25.31■■□□□ 1.64
NOM1-201ENST00000275820 UPF2Q9HAU5 1272 aaKnown RBP25.29■■□□□ 1.64
NOM1-201ENST00000275820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.28■■□□□ 1.644e-8■■■■□ 23.2
NOM1-201ENST00000275820 IRX6P78412 446 aaPredicted RBP25.27■■□□□ 1.64
NOM1-201ENST00000275820 KDM2AQ9Y2K7 1162 aa25.25■■□□□ 1.63
NOM1-201ENST00000275820 HSP90AA1P07900 732 aaKnown RBP25.24■■□□□ 1.63
NOM1-201ENST00000275820 NBR1Q14596 966 aa25.22■■□□□ 1.63
NOM1-201ENST00000275820 EIF4G2P78344 907 aaKnown RBP eCLIP25.21■■□□□ 1.63
NOM1-201ENST00000275820 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.21■■□□□ 1.63
NOM1-201ENST00000275820 TSPY4P0CV99 314 aa25.21■■□□□ 1.63
NOM1-201ENST00000275820 TSPY10P0CW01 314 aa25.21■■□□□ 1.63
NOM1-201ENST00000275820 WDR43Q15061 677 aaKnown RBP eCLIP25.2■■□□□ 1.62
NOM1-201ENST00000275820 RRP7BPQ9NSQ0 103 aa25.18■■□□□ 1.62
NOM1-201ENST00000275820 STAG3Q9UJ98 1225 aa25.18■■□□□ 1.62
NOM1-201ENST00000275820 ANP32BQ92688 251 aaKnown RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms