RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 NISCHQ9Y2I1 1504 aa41.03■■■■■ 4.16
H3F3B-208ENST00000589599 CCDC180Q9P1Z9 1646 aa36.45■■■■□ 3.43
H3F3B-208ENST00000589599 ABCC9O60706 1549 aa35.9■■■■□ 3.34
H3F3B-208ENST00000589599 DCAF8L2P0C7V8 631 aa34.52■■■■□ 3.12
H3F3B-208ENST00000589599 RB1CC1Q8TDY2 1594 aa34.46■■■■□ 3.11
H3F3B-208ENST00000589599 NACADO15069 1562 aa34.39■■■■□ 3.1
H3F3B-208ENST00000589599 MYO15BQ96JP2 1530 aa34.13■■■■□ 3.05
H3F3B-208ENST00000589599 ZCCHC6Q5VYS8 1495 aaKnown RBP34.11■■■■□ 3.05
H3F3B-208ENST00000589599 DCAF1Q9Y4B6 1507 aa33.93■■■■□ 3.02
H3F3B-208ENST00000589599 PABPN1Q86U42 306 aaKnown RBP eCLIP33.6■■■□□ 2.97
H3F3B-208ENST00000589599 UNC13AQ9UPW8 1703 aa33.5■■■□□ 2.95
H3F3B-208ENST00000589599 BICRAQ9NZM4 1560 aa33.34■■■□□ 2.93
H3F3B-208ENST00000589599 SCRIBQ14160 1630 aa33.29■■■□□ 2.92
H3F3B-208ENST00000589599 DNAJC5BQ9UF47 199 aa33.1■■■□□ 2.89
H3F3B-208ENST00000589599 SHROOM4Q9ULL8 1493 aa33.05■■■□□ 2.88
H3F3B-208ENST00000589599 EIF4G1Q04637 1599 aaKnown RBP32.52■■■□□ 2.8
H3F3B-208ENST00000589599 CC2D2AQ9P2K1 1620 aa32.41■■■□□ 2.78
H3F3B-208ENST00000589599 CECR2Q9BXF3 1484 aa32.29■■■□□ 2.76
H3F3B-208ENST00000589599 SMARCA4P51532 1647 aa31.82■■■□□ 2.68
H3F3B-208ENST00000589599 BAZ1AQ9NRL2 1556 aaPredicted RBP31.81■■■□□ 2.68
H3F3B-208ENST00000589599 NCAPD3P42695 1498 aa31.76■■■□□ 2.67
H3F3B-208ENST00000589599 ATAD2BQ9ULI0 1458 aa31.74■■■□□ 2.67
H3F3B-208ENST00000589599 SMARCA2P51531 1590 aa31.69■■■□□ 2.66
H3F3B-208ENST00000589599 MROH2BQ7Z745 1585 aa31.6■■■□□ 2.65
H3F3B-208ENST00000589599 HMGXB3Q12766 1538 aa31.53■■■□□ 2.64
H3F3B-208ENST00000589599 PEG3Q9GZU2 1588 aa31.51■■■□□ 2.63
H3F3B-208ENST00000589599 BAZ1BQ9UIG0 1483 aaKnown RBP31.48■■■□□ 2.63
H3F3B-208ENST00000589599 RSF1Q96T23 1441 aaPredicted RBP31.24■■■□□ 2.59
H3F3B-208ENST00000589599 WIZO95785 1651 aa31.21■■■□□ 2.59
H3F3B-208ENST00000589599 ERCC6Q03468 1493 aa31■■■□□ 2.55
H3F3B-208ENST00000589599 NESP48681 1621 aa30.99■■■□□ 2.55
H3F3B-208ENST00000589599 TOP2AP11388 1531 aaKnown RBP30.92■■■□□ 2.54
H3F3B-208ENST00000589599 LAMC3Q9Y6N6 1575 aa30.9■■■□□ 2.54
H3F3B-208ENST00000589599 CADPSQ9ULU8 1353 aa30.86■■■□□ 2.53
H3F3B-208ENST00000589599 PDS5BQ9NTI5 1447 aa30.8■■■□□ 2.52
H3F3B-208ENST00000589599 CUX2O14529 1486 aa30.68■■■□□ 2.5
H3F3B-208ENST00000589599 CCDC88BA6NC98 1476 aa30.6■■■□□ 2.49
H3F3B-208ENST00000589599 CFTRP13569 1480 aa30.6■■■□□ 2.49
H3F3B-208ENST00000589599 KIF21AQ7Z4S6 1674 aa30.54■■■□□ 2.48
H3F3B-208ENST00000589599 THOC2Q8NI27 1593 aaKnown RBP30.48■■■□□ 2.47
H3F3B-208ENST00000589599 FANCD2Q9BXW9 1451 aa30.47■■■□□ 2.47
H3F3B-208ENST00000589599 SUPT5HO00267 1087 aaKnown RBP30.45■■■□□ 2.47
H3F3B-208ENST00000589599 CEP164Q9UPV0 1460 aa30.44■■■□□ 2.46
H3F3B-208ENST00000589599 MRC2Q9UBG0 1479 aa30.43■■■□□ 2.46
H3F3B-208ENST00000589599 WDR62O43379 1518 aa30.28■■■□□ 2.44
H3F3B-208ENST00000589599 PRDM2Q13029 1718 aa30.2■■■□□ 2.43
H3F3B-208ENST00000589599 URB2Q14146 1524 aaKnown RBP30.14■■■□□ 2.42
H3F3B-208ENST00000589599 ABCC8Q09428 1581 aa30■■■□□ 2.39
H3F3B-208ENST00000589599 DNAJC5Q9H3Z4 198 aa29.97■■■□□ 2.39
H3F3B-208ENST00000589599 TOPBP1Q92547 1522 aa29.95■■■□□ 2.38
H3F3B-208ENST00000589599 DNMBPQ6XZF7 1577 aa29.88■■■□□ 2.37
H3F3B-208ENST00000589599 IFT140Q96RY7 1462 aa29.83■■■□□ 2.37
H3F3B-208ENST00000589599 POLA1P09884 1462 aaPredicted RBP29.68■■■□□ 2.34
H3F3B-208ENST00000589599 ZNF608Q9ULD9 1512 aaPredicted RBP29.66■■■□□ 2.34
H3F3B-208ENST00000589599 CUX1P39880 1505 aa29.65■■■□□ 2.34
H3F3B-208ENST00000589599 SOGA1O94964 1423 aa29.63■■■□□ 2.33
H3F3B-208ENST00000589599 FGD5Q6ZNL6 1462 aa29.6■■■□□ 2.33
H3F3B-208ENST00000589599 TARBP1Q13395 1621 aaKnown RBP29.58■■■□□ 2.33
H3F3B-208ENST00000589599 RAD54L2Q9Y4B4 1467 aa29.57■■■□□ 2.32
H3F3B-208ENST00000589599 AQRO60306 1485 aaKnown RBP eCLIP29.53■■■□□ 2.322e-9■■■■□ 20.2
H3F3B-208ENST00000589599 OSCARQ8IYS5 282 aa29.5■■■□□ 2.31
H3F3B-208ENST00000589599 EIF4G3O43432 1585 aaKnown RBP29.48■■■□□ 2.31
H3F3B-208ENST00000589599 TDRD9Q8NDG6 1382 aaKnown RBP29.48■■■□□ 2.31
H3F3B-208ENST00000589599 WRNQ14191 1432 aaPredicted RBP eCLIP29.47■■■□□ 2.317e-8■□□□□ 11.3
H3F3B-208ENST00000589599 WDR97A6NE52 1622 aa29.37■■■□□ 2.29
H3F3B-208ENST00000589599 TOP2BQ02880 1626 aa29.35■■■□□ 2.29
H3F3B-208ENST00000589599 SYNJ1O43426 1573 aa29.32■■■□□ 2.28
H3F3B-208ENST00000589599 BIVM-ERCC5R4GMW8 1640 aa29.31■■■□□ 2.28
H3F3B-208ENST00000589599 ABCA10Q8WWZ4 1543 aa29.3■■■□□ 2.28
H3F3B-208ENST00000589599 FBLN2P98095 1184 aa29.3■■■□□ 2.28
H3F3B-208ENST00000589599 GRIN2BQ13224 1484 aa29.28■■■□□ 2.28
H3F3B-208ENST00000589599 GAPVD1Q14C86 1478 aa29.25■■■□□ 2.27
H3F3B-208ENST00000589599 SNAPC4Q5SXM2 1469 aa29.22■■■□□ 2.27
H3F3B-208ENST00000589599 CHMP7Q8WUX9 453 aaPredicted RBP29.2■■■□□ 2.26
H3F3B-208ENST00000589599 MAGI1Q96QZ7 1491 aaPredicted RBP29.19■■■□□ 2.26
H3F3B-208ENST00000589599 ABCA5Q8WWZ7 1642 aa29.13■■■□□ 2.25
H3F3B-208ENST00000589599 CHD1O14646 1710 aa29.1■■■□□ 2.25
H3F3B-208ENST00000589599 SYNJ2O15056 1496 aa29.09■■■□□ 2.25
H3F3B-208ENST00000589599 PBRM1Q86U86 1689 aa29.06■■■□□ 2.24
H3F3B-208ENST00000589599 TRIM41Q8WV44 630 aa28.96■■■□□ 2.23
H3F3B-208ENST00000589599 ERICH3Q5RHP9 1530 aa28.95■■■□□ 2.23
H3F3B-208ENST00000589599 FHAD1B1AJZ9 1412 aa28.93■■■□□ 2.22
H3F3B-208ENST00000589599 KIF27Q86VH2 1401 aa28.9■■■□□ 2.22
H3F3B-208ENST00000589599 ARHGEF11O15085 1522 aa28.88■■■□□ 2.21
H3F3B-208ENST00000589599 ADAMTS12P58397 1594 aa28.88■■■□□ 2.21
H3F3B-208ENST00000589599 RIMBP3CA6NJZ7 1639 aa28.87■■■□□ 2.21
H3F3B-208ENST00000589599 RIMBP3BA6NNM3 1639 aa28.87■■■□□ 2.21
H3F3B-208ENST00000589599 RIMBP3Q9UFD9 1639 aa28.87■■■□□ 2.21
H3F3B-208ENST00000589599 GRIN2AQ12879 1464 aa28.86■■■□□ 2.21
H3F3B-208ENST00000589599 CLASP1Q7Z460 1538 aa28.84■■■□□ 2.21
H3F3B-208ENST00000589599 IGF1RP08069 1367 aa28.8■■■□□ 2.2
H3F3B-208ENST00000589599 CYB5RLQ6IPT4 315 aa28.75■■■□□ 2.19
H3F3B-208ENST00000589599 NUP160Q12769 1436 aa28.74■■■□□ 2.19
H3F3B-208ENST00000589599 CEP170Q5SW79 1584 aa28.67■■■□□ 2.18
H3F3B-208ENST00000589599 CARMIL1Q5VZK9 1371 aa28.63■■■□□ 2.17
H3F3B-208ENST00000589599 ARAP1Q96P48 1450 aa28.63■■■□□ 2.17
H3F3B-208ENST00000589599 CUL7Q14999 1698 aa28.63■■■□□ 2.17
H3F3B-208ENST00000589599 JPH4Q96JJ6 628 aa28.55■■■□□ 2.16
H3F3B-208ENST00000589599 RUSC2Q8N2Y8 1516 aa28.52■■■□□ 2.16
H3F3B-208ENST00000589599 KIAA0586Q9BVV6 1533 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms