Protein–RNA interactions for Protein: Q9H158

PCDHAC1, Protocadherin alpha-C1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1Q9H158 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHAC1Q9H158 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHAC1Q9H158 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHAC1Q9H158 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
PCDHAC1Q9H158 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHAC1Q9H158 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.37■■□□□ 1.65
PCDHAC1Q9H158 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHAC1Q9H158 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDHAC1Q9H158 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHAC1Q9H158 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHAC1Q9H158 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC25.36■■□□□ 1.65
PCDHAC1Q9H158 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.35■■□□□ 1.65
PCDHAC1Q9H158 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHAC1Q9H158 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHAC1Q9H158 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHAC1Q9H158 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHAC1Q9H158 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHAC1Q9H158 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHAC1Q9H158 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHAC1Q9H158 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHAC1Q9H158 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHAC1Q9H158 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHAC1Q9H158 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHAC1Q9H158 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
PCDHAC1Q9H158 AC142086.6-201ENST00000621154 1765 ntBASIC25.28■■□□□ 1.64
PCDHAC1Q9H158 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
PCDHAC1Q9H158 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHAC1Q9H158 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.26■■□□□ 1.63
PCDHAC1Q9H158 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PCDHAC1Q9H158 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHAC1Q9H158 DYNLL1-208ENST00000550178 581 ntBASIC25.26■■□□□ 1.63
PCDHAC1Q9H158 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHAC1Q9H158 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHAC1Q9H158 AL135925.1-201ENST00000605920 1701 ntBASIC25.25■■□□□ 1.63
PCDHAC1Q9H158 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.24■■□□□ 1.63
PCDHAC1Q9H158 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHAC1Q9H158 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHAC1Q9H158 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.23■■□□□ 1.63
PCDHAC1Q9H158 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHAC1Q9H158 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHAC1Q9H158 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.21■■□□□ 1.63
PCDHAC1Q9H158 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.21■■□□□ 1.63
PCDHAC1Q9H158 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
PCDHAC1Q9H158 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDHAC1Q9H158 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHAC1Q9H158 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.19■■□□□ 1.62
PCDHAC1Q9H158 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
PCDHAC1Q9H158 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHAC1Q9H158 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.18■■□□□ 1.62
PCDHAC1Q9H158 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHAC1Q9H158 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHAC1Q9H158 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHAC1Q9H158 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHAC1Q9H158 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
PCDHAC1Q9H158 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHAC1Q9H158 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
PCDHAC1Q9H158 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHAC1Q9H158 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHAC1Q9H158 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHAC1Q9H158 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
PCDHAC1Q9H158 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
PCDHAC1Q9H158 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
PCDHAC1Q9H158 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.12■■□□□ 1.61
PCDHAC1Q9H158 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHAC1Q9H158 AL031258.1-201ENST00000623562 325 ntBASIC25.12■■□□□ 1.61
PCDHAC1Q9H158 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHAC1Q9H158 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHAC1Q9H158 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHAC1Q9H158 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHAC1Q9H158 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHAC1Q9H158 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.08■■□□□ 1.61
PCDHAC1Q9H158 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHAC1Q9H158 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHAC1Q9H158 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
PCDHAC1Q9H158 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHAC1Q9H158 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHAC1Q9H158 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHAC1Q9H158 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHAC1Q9H158 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHAC1Q9H158 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHAC1Q9H158 AP002365.1-201ENST00000603448 772 ntBASIC25.03■■□□□ 1.6
PCDHAC1Q9H158 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHAC1Q9H158 AL139393.2-201ENST00000608721 2025 ntBASIC25.03■■□□□ 1.6
PCDHAC1Q9H158 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHAC1Q9H158 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHAC1Q9H158 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.02■■□□□ 1.6
PCDHAC1Q9H158 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDHAC1Q9H158 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
PCDHAC1Q9H158 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHAC1Q9H158 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
PCDHAC1Q9H158 DRD5P2-201ENST00000421395 2012 ntBASIC25.01■■□□□ 1.59
PCDHAC1Q9H158 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.01■■□□□ 1.59
PCDHAC1Q9H158 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHAC1Q9H158 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHAC1Q9H158 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHAC1Q9H158 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
PCDHAC1Q9H158 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHAC1Q9H158 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHAC1Q9H158 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHAC1Q9H158 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms