RNA–Protein interactions for RNA: ENST00000344150.8

CARM1-202, Transcript of coactivator associated arginine methyltransferase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CARM1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARM1-202ENST00000344150 NISCHQ9Y2I1 1504 aa53.08■■■■■ 6.09
CARM1-202ENST00000344150 SHROOM4Q9ULL8 1493 aa45.22■■■■■ 4.83
CARM1-202ENST00000344150 CCDC180Q9P1Z9 1646 aa45.21■■■■■ 4.83
CARM1-202ENST00000344150 ZCCHC6Q5VYS8 1495 aaKnown RBP44.78■■■■■ 4.76
CARM1-202ENST00000344150 DCAF8L2P0C7V8 631 aa44.48■■■■■ 4.71
CARM1-202ENST00000344150 SUPT5HO00267 1087 aaKnown RBP44.15■■■■■ 4.66
CARM1-202ENST00000344150 DCAF1Q9Y4B6 1507 aa43.41■■■■■ 4.54
CARM1-202ENST00000344150 CHIC1Q5VXU3 224 aa42.6■■■■■ 4.41
CARM1-202ENST00000344150 ABCC9O60706 1549 aa42.51■■■■■ 4.4
CARM1-202ENST00000344150 SCRIBQ14160 1630 aa42.51■■■■■ 4.4
CARM1-202ENST00000344150 MYO15BQ96JP2 1530 aa42.31■■■■■ 4.36
CARM1-202ENST00000344150 NACADO15069 1562 aa41.95■■■■■ 4.31
CARM1-202ENST00000344150 RSF1Q96T23 1441 aaPredicted RBP41.89■■■■■ 4.3
CARM1-202ENST00000344150 CECR2Q9BXF3 1484 aa41.54■■■■■ 4.24
CARM1-202ENST00000344150 LOC105371045A0A1W2PR82 267 aa41.44■■■■■ 4.22
CARM1-202ENST00000344150 RB1CC1Q8TDY2 1594 aa41.4■■■■■ 4.22
CARM1-202ENST00000344150 MROH2BQ7Z745 1585 aa41.31■■■■■ 4.2
CARM1-202ENST00000344150 WIZO95785 1651 aa41.08■■■■■ 4.17
CARM1-202ENST00000344150 TRIM41Q8WV44 630 aa41.08■■■■■ 4.17
CARM1-202ENST00000344150 PCGF6Q9BYE7 350 aa40.94■■■■■ 4.14
CARM1-202ENST00000344150 FAM9AQ8IZU1 332 aaPredicted RBP40.87■■■■■ 4.13
CARM1-202ENST00000344150 UNC13AQ9UPW8 1703 aa40.8■■■■■ 4.12
CARM1-202ENST00000344150 BAZ1AQ9NRL2 1556 aaPredicted RBP40.78■■■■■ 4.12
CARM1-202ENST00000344150 PABPN1Q86U42 306 aaKnown RBP eCLIP40.66■■■■■ 4.16e-6■■□□□ 12.8
CARM1-202ENST00000344150 EHMT2Q96KQ7 1210 aa40.64■■■■■ 4.1
CARM1-202ENST00000344150 SMARCA4P51532 1647 aa40.51■■■■■ 4.08
CARM1-202ENST00000344150 HRCP23327 699 aa40.5■■■■■ 4.07
CARM1-202ENST00000344150 TOP2AP11388 1531 aaKnown RBP40.33■■■■■ 4.05
CARM1-202ENST00000344150 BICRAQ9NZM4 1560 aa40.3■■■■■ 4.04
CARM1-202ENST00000344150 CCDC88BA6NC98 1476 aa40.24■■■■■ 4.03
CARM1-202ENST00000344150 EIF4G1Q04637 1599 aaKnown RBP40.19■■■■■ 4.02
CARM1-202ENST00000344150 TRIM26Q12899 539 aaPredicted RBP40.13■■■■■ 4.01
CARM1-202ENST00000344150 SMARCA2P51531 1590 aa40.13■■■■■ 4.01
CARM1-202ENST00000344150 ABCC8Q09428 1581 aa40.05■■■■■ 4
CARM1-202ENST00000344150 PPARGC1BQ86YN6 1023 aaKnown RBP39.92■■■■□ 3.98
CARM1-202ENST00000344150 PEG3Q9GZU2 1588 aa39.65■■■■□ 3.94
CARM1-202ENST00000344150 ATAD2BQ9ULI0 1458 aa39.61■■■■□ 3.93
CARM1-202ENST00000344150 SOGA1O94964 1423 aa39.6■■■■□ 3.93
CARM1-202ENST00000344150 BAZ1BQ9UIG0 1483 aaKnown RBP39.5■■■■□ 3.91
CARM1-202ENST00000344150 RUSC2Q8N2Y8 1516 aa39.45■■■■□ 3.91
CARM1-202ENST00000344150 WRNQ14191 1432 aaPredicted RBP eCLIP39.38■■■■□ 3.89
CARM1-202ENST00000344150 CSRNP3Q8WYN3 585 aa39.33■■■■□ 3.89
CARM1-202ENST00000344150 UBTFP17480 764 aaKnown RBP39.24■■■■□ 3.87
CARM1-202ENST00000344150 SYNJ1O43426 1573 aa39.19■■■■□ 3.86
CARM1-202ENST00000344150 TTBK1Q5TCY1 1321 aaPredicted RBP39.18■■■■□ 3.86
CARM1-202ENST00000344150 CEP162Q5TB80 1403 aa39.16■■■■□ 3.86
CARM1-202ENST00000344150 EEA1Q15075 1411 aa39.14■■■■□ 3.86
CARM1-202ENST00000344150 TNIKQ9UKE5 1360 aa39.09■■■■□ 3.85
CARM1-202ENST00000344150 ZEB1P37275 1124 aaPredicted RBP38.96■■■■□ 3.83
CARM1-202ENST00000344150 GOLGA3Q08378 1498 aa38.94■■■■□ 3.82
CARM1-202ENST00000344150 NCAPD3P42695 1498 aa38.86■■■■□ 3.81
CARM1-202ENST00000344150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.77■■■■□ 3.8
CARM1-202ENST00000344150 HMGXB3Q12766 1538 aa38.77■■■■□ 3.8
CARM1-202ENST00000344150 CEP164Q9UPV0 1460 aa38.75■■■■□ 3.79
CARM1-202ENST00000344150 RANGAP1P46060 587 aaPredicted RBP38.73■■■■□ 3.79
CARM1-202ENST00000344150 TOP2BQ02880 1626 aa38.68■■■■□ 3.78
CARM1-202ENST00000344150 KIF21BO75037 1637 aa38.64■■■■□ 3.78
CARM1-202ENST00000344150 RAPGEF2Q9Y4G8 1499 aa38.62■■■■□ 3.77
CARM1-202ENST00000344150 CCER1Q8TC90 406 aaPredicted RBP38.59■■■■□ 3.77
CARM1-202ENST00000344150 CLIP1P30622 1438 aa38.54■■■■□ 3.76
CARM1-202ENST00000344150 BIVM-ERCC5R4GMW8 1640 aa38.51■■■■□ 3.76
CARM1-202ENST00000344150 CUX1P39880 1505 aa38.46■■■■□ 3.75
CARM1-202ENST00000344150 CFTRP13569 1480 aa38.45■■■■□ 3.75
CARM1-202ENST00000344150 VPS8Q8N3P4 1428 aa38.26■■■■□ 3.72
CARM1-202ENST00000344150 APLP2Q06481 763 aa38.22■■■■□ 3.71
CARM1-202ENST00000344150 PRXQ9BXM0 1461 aa38.21■■■■□ 3.71
CARM1-202ENST00000344150 KIF27Q86VH2 1401 aa38.18■■■■□ 3.7
CARM1-202ENST00000344150 CC2D2AQ9P2K1 1620 aa38.18■■■■□ 3.7
CARM1-202ENST00000344150 CADPSQ9ULU8 1353 aa38.15■■■■□ 3.7
CARM1-202ENST00000344150 HNRNPUL2Q1KMD3 747 aaKnown RBP38.15■■■■□ 3.7
CARM1-202ENST00000344150 ERICH3Q5RHP9 1530 aa38.09■■■■□ 3.69
CARM1-202ENST00000344150 PRDM2Q13029 1718 aa38.01■■■■□ 3.68
CARM1-202ENST00000344150 CUX2O14529 1486 aa37.97■■■■□ 3.67
CARM1-202ENST00000344150 ARAP1Q96P48 1450 aa37.93■■■■□ 3.66
CARM1-202ENST00000344150 FGD5Q6ZNL6 1462 aa37.87■■■■□ 3.65
CARM1-202ENST00000344150 IGF1RP08069 1367 aa37.84■■■■□ 3.65
CARM1-202ENST00000344150 KANK4Q5T7N3 995 aaPredicted RBP37.81■■■■□ 3.64
CARM1-202ENST00000344150 FANCD2Q9BXW9 1451 aa37.8■■■■□ 3.64
CARM1-202ENST00000344150 NESP48681 1621 aa37.75■■■■□ 3.63
CARM1-202ENST00000344150 ARHGAP35Q9NRY4 1499 aa37.7■■■■□ 3.63
CARM1-202ENST00000344150 CARMIL1Q5VZK9 1371 aa37.69■■■■□ 3.62
CARM1-202ENST00000344150 RAD54L2Q9Y4B4 1467 aa37.61■■■■□ 3.61
CARM1-202ENST00000344150 DNAJC5BQ9UF47 199 aa37.56■■■■□ 3.6
CARM1-202ENST00000344150 DIEXFQ68CQ4 756 aaKnown RBP37.53■■■■□ 3.6
CARM1-202ENST00000344150 TOPBP1Q92547 1522 aa37.49■■■■□ 3.59
CARM1-202ENST00000344150 P3H3Q8IVL6 736 aa37.48■■■■□ 3.59
CARM1-202ENST00000344150 DNMBPQ6XZF7 1577 aa37.48■■■■□ 3.59
CARM1-202ENST00000344150 POLA1P09884 1462 aaPredicted RBP37.46■■■■□ 3.59
CARM1-202ENST00000344150 ITGAEP38570 1179 aa37.37■■■■□ 3.57
CARM1-202ENST00000344150 ZNF316A6NFI3 1004 aaPredicted RBP37.35■■■■□ 3.57
CARM1-202ENST00000344150 ABCA10Q8WWZ4 1543 aa37.34■■■■□ 3.57
CARM1-202ENST00000344150 ATP1B4Q9UN42 357 aaPredicted RBP37.33■■■■□ 3.57
CARM1-202ENST00000344150 URB2Q14146 1524 aaKnown RBP37.27■■■■□ 3.56
CARM1-202ENST00000344150 RRBP1Q9P2E9 1410 aaKnown RBP37.27■■■■□ 3.56
CARM1-202ENST00000344150 LAMC3Q9Y6N6 1575 aa37.24■■■■□ 3.55
CARM1-202ENST00000344150 CCNB3Q8WWL7 1395 aa37.23■■■■□ 3.55
CARM1-202ENST00000344150 TDRD9Q8NDG6 1382 aaKnown RBP37.21■■■■□ 3.55
CARM1-202ENST00000344150 DHX57Q6P158 1386 aaKnown RBP37.17■■■■□ 3.54
CARM1-202ENST00000344150 TIAM1Q13009 1591 aa37.16■■■■□ 3.54
CARM1-202ENST00000344150 FHOD3Q2V2M9 1422 aa37.16■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms