Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.06■■■□□ 2.72
LSG1Q9H089 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.05■■■□□ 2.72
LSG1Q9H089 CAHM-201ENST00000604200 896 ntBASIC32.05■■■□□ 2.72
LSG1Q9H089 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
LSG1Q9H089 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
LSG1Q9H089 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.04■■■□□ 2.72
LSG1Q9H089 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.04■■■□□ 2.72
LSG1Q9H089 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
LSG1Q9H089 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
LSG1Q9H089 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
LSG1Q9H089 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
LSG1Q9H089 AL135925.1-201ENST00000605920 1701 ntBASIC32.03■■■□□ 2.72
LSG1Q9H089 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.02■■■□□ 2.72
LSG1Q9H089 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
LSG1Q9H089 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
LSG1Q9H089 AC097358.2-201ENST00000607541 1159 ntBASIC32.01■■■□□ 2.71
LSG1Q9H089 AL391121.1-201ENST00000607967 1349 ntBASIC32■■■□□ 2.71
LSG1Q9H089 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32■■■□□ 2.71
LSG1Q9H089 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
LSG1Q9H089 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
LSG1Q9H089 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.98■■■□□ 2.71
LSG1Q9H089 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
LSG1Q9H089 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
LSG1Q9H089 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
LSG1Q9H089 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
LSG1Q9H089 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
LSG1Q9H089 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.97■■■□□ 2.71
LSG1Q9H089 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
LSG1Q9H089 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
LSG1Q9H089 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
LSG1Q9H089 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
LSG1Q9H089 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.7
LSG1Q9H089 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
LSG1Q9H089 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
LSG1Q9H089 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
LSG1Q9H089 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.93■■■□□ 2.7
LSG1Q9H089 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
LSG1Q9H089 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
LSG1Q9H089 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
LSG1Q9H089 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
LSG1Q9H089 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
LSG1Q9H089 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
LSG1Q9H089 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
LSG1Q9H089 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
LSG1Q9H089 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
LSG1Q9H089 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
LSG1Q9H089 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
LSG1Q9H089 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.9■■■□□ 2.7
LSG1Q9H089 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
LSG1Q9H089 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.89■■■□□ 2.7
LSG1Q9H089 ABCB10P3-201ENST00000561950 2166 ntBASIC31.89■■■□□ 2.7
LSG1Q9H089 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
LSG1Q9H089 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.88■■■□□ 2.69
LSG1Q9H089 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
LSG1Q9H089 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LSG1Q9H089 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LSG1Q9H089 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.87■■■□□ 2.69
LSG1Q9H089 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.86■■■□□ 2.69
LSG1Q9H089 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
LSG1Q9H089 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
LSG1Q9H089 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.86■■■□□ 2.69
LSG1Q9H089 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
LSG1Q9H089 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
LSG1Q9H089 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
LSG1Q9H089 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
LSG1Q9H089 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.82■■■□□ 2.68
LSG1Q9H089 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
LSG1Q9H089 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
LSG1Q9H089 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
LSG1Q9H089 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.78■■■□□ 2.68
LSG1Q9H089 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
LSG1Q9H089 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
LSG1Q9H089 AC139426.1-201ENST00000568218 2529 ntBASIC31.76■■■□□ 2.68
LSG1Q9H089 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
LSG1Q9H089 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
LSG1Q9H089 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
LSG1Q9H089 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.74■■■□□ 2.67
LSG1Q9H089 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
LSG1Q9H089 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
LSG1Q9H089 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
LSG1Q9H089 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.73■■■□□ 2.67
LSG1Q9H089 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
LSG1Q9H089 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
LSG1Q9H089 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
LSG1Q9H089 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
LSG1Q9H089 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
LSG1Q9H089 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.72■■■□□ 2.67
LSG1Q9H089 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
LSG1Q9H089 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.71■■■□□ 2.67
LSG1Q9H089 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
LSG1Q9H089 SUZ12P1-203ENST00000578195 985 ntBASIC31.7■■■□□ 2.67
LSG1Q9H089 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
LSG1Q9H089 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.69■■■□□ 2.66
LSG1Q9H089 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
LSG1Q9H089 AC010864.1-201ENST00000609407 1511 ntBASIC31.69■■■□□ 2.66
LSG1Q9H089 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.68■■■□□ 2.66
LSG1Q9H089 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.68■■■□□ 2.66
LSG1Q9H089 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
LSG1Q9H089 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
LSG1Q9H089 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms