Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF2Q99496 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF2Q99496 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF2Q99496 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF2Q99496 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RNF2Q99496 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF2Q99496 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
RNF2Q99496 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF2Q99496 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF2Q99496 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF2Q99496 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF2Q99496 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF2Q99496 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF2Q99496 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF2Q99496 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF2Q99496 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF2Q99496 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF2Q99496 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF2Q99496 ST7-AS1-201ENST00000456775 1889 ntBASIC20.92■□□□□ 0.94
RNF2Q99496 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF2Q99496 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
RNF2Q99496 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF2Q99496 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF2Q99496 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF2Q99496 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RNF2Q99496 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF2Q99496 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF2Q99496 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF2Q99496 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.89■□□□□ 0.93
RNF2Q99496 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF2Q99496 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF2Q99496 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF2Q99496 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF2Q99496 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RNF2Q99496 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF2Q99496 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF2Q99496 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF2Q99496 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.84■□□□□ 0.93
RNF2Q99496 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF2Q99496 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF2Q99496 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF2Q99496 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RNF2Q99496 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RNF2Q99496 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF2Q99496 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF2Q99496 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF2Q99496 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RNF2Q99496 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RNF2Q99496 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF2Q99496 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF2Q99496 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RNF2Q99496 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF2Q99496 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF2Q99496 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF2Q99496 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF2Q99496 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF2Q99496 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RNF2Q99496 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF2Q99496 RARRES2P7-201ENST00000567349 469 ntBASIC20.75■□□□□ 0.91
RNF2Q99496 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RNF2Q99496 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF2Q99496 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RNF2Q99496 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF2Q99496 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF2Q99496 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF2Q99496 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RNF2Q99496 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF2Q99496 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF2Q99496 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF2Q99496 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF2Q99496 AC142086.6-201ENST00000621154 1765 ntBASIC20.72■□□□□ 0.91
RNF2Q99496 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF2Q99496 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF2Q99496 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.71■□□□□ 0.91
RNF2Q99496 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF2Q99496 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF2Q99496 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RNF2Q99496 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF2Q99496 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF2Q99496 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF2Q99496 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF2Q99496 AL135925.1-201ENST00000605920 1701 ntBASIC20.7■□□□□ 0.9
RNF2Q99496 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF2Q99496 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF2Q99496 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF2Q99496 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF2Q99496 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
RNF2Q99496 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF2Q99496 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF2Q99496 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF2Q99496 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
RNF2Q99496 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF2Q99496 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF2Q99496 SETD8P1-201ENST00000623146 1180 ntBASIC20.65■□□□□ 0.9
RNF2Q99496 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RNF2Q99496 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF2Q99496 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF2Q99496 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF2Q99496 AL133380.1-201ENST00000506013 324 ntBASIC20.64■□□□□ 0.89
RNF2Q99496 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms