Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CRLF3Q8IUI8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
CRLF3Q8IUI8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
CRLF3Q8IUI8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.44■■□□□ 1.82
CRLF3Q8IUI8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.43■■□□□ 1.82
CRLF3Q8IUI8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.43■■□□□ 1.82
CRLF3Q8IUI8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
CRLF3Q8IUI8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.43■■□□□ 1.82
CRLF3Q8IUI8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CRLF3Q8IUI8 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CRLF3Q8IUI8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.42■■□□□ 1.82
CRLF3Q8IUI8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CRLF3Q8IUI8 AL161658.1-201ENST00000623641 1967 ntBASIC26.41■■□□□ 1.82
CRLF3Q8IUI8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.39■■□□□ 1.82
CRLF3Q8IUI8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CRLF3Q8IUI8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.38■■□□□ 1.81
CRLF3Q8IUI8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CRLF3Q8IUI8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.36■■□□□ 1.81
CRLF3Q8IUI8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CRLF3Q8IUI8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.35■■□□□ 1.81
CRLF3Q8IUI8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CRLF3Q8IUI8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CRLF3Q8IUI8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.34■■□□□ 1.81
CRLF3Q8IUI8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CRLF3Q8IUI8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.33■■□□□ 1.81
CRLF3Q8IUI8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CRLF3Q8IUI8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CRLF3Q8IUI8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CRLF3Q8IUI8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRLF3Q8IUI8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CRLF3Q8IUI8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CRLF3Q8IUI8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRLF3Q8IUI8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRLF3Q8IUI8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CRLF3Q8IUI8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRLF3Q8IUI8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.3■■□□□ 1.8
CRLF3Q8IUI8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRLF3Q8IUI8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CRLF3Q8IUI8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CRLF3Q8IUI8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CRLF3Q8IUI8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CRLF3Q8IUI8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CRLF3Q8IUI8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CRLF3Q8IUI8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CRLF3Q8IUI8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CRLF3Q8IUI8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRLF3Q8IUI8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRLF3Q8IUI8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRLF3Q8IUI8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRLF3Q8IUI8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CRLF3Q8IUI8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CRLF3Q8IUI8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.23■■□□□ 1.79
CRLF3Q8IUI8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CRLF3Q8IUI8 RARRES2P7-201ENST00000567349 469 ntBASIC26.22■■□□□ 1.79
CRLF3Q8IUI8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.21■■□□□ 1.79
CRLF3Q8IUI8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
CRLF3Q8IUI8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CRLF3Q8IUI8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CRLF3Q8IUI8 AC142086.6-201ENST00000621154 1765 ntBASIC26.2■■□□□ 1.78
CRLF3Q8IUI8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CRLF3Q8IUI8 AL135925.1-201ENST00000605920 1701 ntBASIC26.19■■□□□ 1.78
CRLF3Q8IUI8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
CRLF3Q8IUI8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CRLF3Q8IUI8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CRLF3Q8IUI8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CRLF3Q8IUI8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CRLF3Q8IUI8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CRLF3Q8IUI8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CRLF3Q8IUI8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CRLF3Q8IUI8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.15■■□□□ 1.78
CRLF3Q8IUI8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.15■■□□□ 1.78
CRLF3Q8IUI8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CRLF3Q8IUI8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
CRLF3Q8IUI8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
CRLF3Q8IUI8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CRLF3Q8IUI8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CRLF3Q8IUI8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.14■■□□□ 1.78
CRLF3Q8IUI8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CRLF3Q8IUI8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CRLF3Q8IUI8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
CRLF3Q8IUI8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CRLF3Q8IUI8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CRLF3Q8IUI8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.12■■□□□ 1.77
CRLF3Q8IUI8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CRLF3Q8IUI8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CRLF3Q8IUI8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.11■■□□□ 1.77
CRLF3Q8IUI8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CRLF3Q8IUI8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.11■■□□□ 1.77
CRLF3Q8IUI8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CRLF3Q8IUI8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.1■■□□□ 1.77
CRLF3Q8IUI8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CRLF3Q8IUI8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
CRLF3Q8IUI8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms