Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFA1O15239 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFA1O15239 AC142086.6-201ENST00000621154 1765 ntBASIC18.14■□□□□ 0.5
NDUFA1O15239 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.14■□□□□ 0.49
NDUFA1O15239 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
NDUFA1O15239 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFA1O15239 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA1O15239 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA1O15239 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA1O15239 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NDUFA1O15239 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.12■□□□□ 0.49
NDUFA1O15239 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFA1O15239 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.11■□□□□ 0.49
NDUFA1O15239 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NDUFA1O15239 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFA1O15239 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDUFA1O15239 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.09■□□□□ 0.49
NDUFA1O15239 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDUFA1O15239 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NDUFA1O15239 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDUFA1O15239 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
NDUFA1O15239 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.08■□□□□ 0.49
NDUFA1O15239 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NDUFA1O15239 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NDUFA1O15239 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
NDUFA1O15239 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NDUFA1O15239 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NDUFA1O15239 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.07■□□□□ 0.48
NDUFA1O15239 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFA1O15239 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFA1O15239 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.06■□□□□ 0.48
NDUFA1O15239 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFA1O15239 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NDUFA1O15239 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFA1O15239 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDUFA1O15239 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFA1O15239 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.05■□□□□ 0.48
NDUFA1O15239 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFA1O15239 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NDUFA1O15239 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFA1O15239 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.04■□□□□ 0.48
NDUFA1O15239 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NDUFA1O15239 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NDUFA1O15239 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDUFA1O15239 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NDUFA1O15239 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NDUFA1O15239 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NDUFA1O15239 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFA1O15239 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFA1O15239 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFA1O15239 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
NDUFA1O15239 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18■□□□□ 0.47
NDUFA1O15239 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NDUFA1O15239 DYNLL1-208ENST00000550178 581 ntBASIC18■□□□□ 0.47
NDUFA1O15239 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NDUFA1O15239 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFA1O15239 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFA1O15239 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFA1O15239 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFA1O15239 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFA1O15239 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFA1O15239 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NDUFA1O15239 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NDUFA1O15239 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFA1O15239 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NDUFA1O15239 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
NDUFA1O15239 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC17.98■□□□□ 0.47
NDUFA1O15239 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFA1O15239 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFA1O15239 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NDUFA1O15239 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NDUFA1O15239 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NDUFA1O15239 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC17.94■□□□□ 0.46
NDUFA1O15239 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFA1O15239 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFA1O15239 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFA1O15239 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NDUFA1O15239 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDUFA1O15239 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NDUFA1O15239 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NDUFA1O15239 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDUFA1O15239 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NDUFA1O15239 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDUFA1O15239 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDUFA1O15239 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDUFA1O15239 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NDUFA1O15239 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NDUFA1O15239 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC17.9■□□□□ 0.46
NDUFA1O15239 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NDUFA1O15239 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDUFA1O15239 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.89■□□□□ 0.45
NDUFA1O15239 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NDUFA1O15239 AL135925.1-201ENST00000605920 1701 ntBASIC17.88■□□□□ 0.45
NDUFA1O15239 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.88■□□□□ 0.45
NDUFA1O15239 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDUFA1O15239 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.86■□□□□ 0.45
NDUFA1O15239 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NDUFA1O15239 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC17.86■□□□□ 0.45
NDUFA1O15239 AP002365.1-201ENST00000603448 772 ntBASIC17.86■□□□□ 0.45
NDUFA1O15239 AL031258.1-201ENST00000623562 325 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms