Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC32.34■■■□□ 2.77
SNCAIPQ9Y6H5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
SNCAIPQ9Y6H5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.33■■■□□ 2.77
SNCAIPQ9Y6H5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
SNCAIPQ9Y6H5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SNCAIPQ9Y6H5 ZNRF2P2-203ENST00000454624 420 ntBASIC32.31■■■□□ 2.76
SNCAIPQ9Y6H5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
SNCAIPQ9Y6H5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.29■■■□□ 2.76
SNCAIPQ9Y6H5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SNCAIPQ9Y6H5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SNCAIPQ9Y6H5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SNCAIPQ9Y6H5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC32.27■■■□□ 2.76
SNCAIPQ9Y6H5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
SNCAIPQ9Y6H5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.26■■■□□ 2.75
SNCAIPQ9Y6H5 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.75
SNCAIPQ9Y6H5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
SNCAIPQ9Y6H5 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
SNCAIPQ9Y6H5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SNCAIPQ9Y6H5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC32.22■■■□□ 2.75
SNCAIPQ9Y6H5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.21■■■□□ 2.75
SNCAIPQ9Y6H5 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
SNCAIPQ9Y6H5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SNCAIPQ9Y6H5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
SNCAIPQ9Y6H5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.18■■■□□ 2.74
SNCAIPQ9Y6H5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SNCAIPQ9Y6H5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC32.17■■■□□ 2.74
SNCAIPQ9Y6H5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.16■■■□□ 2.74
SNCAIPQ9Y6H5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SNCAIPQ9Y6H5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SNCAIPQ9Y6H5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SNCAIPQ9Y6H5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SNCAIPQ9Y6H5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
SNCAIPQ9Y6H5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.14■■■□□ 2.74
SNCAIPQ9Y6H5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC32.13■■■□□ 2.73
SNCAIPQ9Y6H5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SNCAIPQ9Y6H5 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
SNCAIPQ9Y6H5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SNCAIPQ9Y6H5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SNCAIPQ9Y6H5 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
SNCAIPQ9Y6H5 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
SNCAIPQ9Y6H5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.09■■■□□ 2.73
SNCAIPQ9Y6H5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SNCAIPQ9Y6H5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
SNCAIPQ9Y6H5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
SNCAIPQ9Y6H5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.05■■■□□ 2.72
SNCAIPQ9Y6H5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
SNCAIPQ9Y6H5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.05■■■□□ 2.72
SNCAIPQ9Y6H5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
SNCAIPQ9Y6H5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
SNCAIPQ9Y6H5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.04■■■□□ 2.72
SNCAIPQ9Y6H5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SNCAIPQ9Y6H5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
SNCAIPQ9Y6H5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.02■■■□□ 2.72
SNCAIPQ9Y6H5 DUX4L29-201ENST00000425409 679 ntBASIC32.02■■■□□ 2.72
SNCAIPQ9Y6H5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.01■■■□□ 2.71
SNCAIPQ9Y6H5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.71
SNCAIPQ9Y6H5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC32■■■□□ 2.71
SNCAIPQ9Y6H5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32■■■□□ 2.71
SNCAIPQ9Y6H5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SNCAIPQ9Y6H5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
SNCAIPQ9Y6H5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SNCAIPQ9Y6H5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SNCAIPQ9Y6H5 AC021231.2-201ENST00000594613 730 ntBASIC31.95■■■□□ 2.71
SNCAIPQ9Y6H5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
SNCAIPQ9Y6H5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.94■■■□□ 2.7
SNCAIPQ9Y6H5 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SNCAIPQ9Y6H5 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SNCAIPQ9Y6H5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.93■■■□□ 2.7
SNCAIPQ9Y6H5 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SNCAIPQ9Y6H5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SNCAIPQ9Y6H5 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SNCAIPQ9Y6H5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.9■■■□□ 2.7
SNCAIPQ9Y6H5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.89■■■□□ 2.69
SNCAIPQ9Y6H5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.87■■■□□ 2.69
SNCAIPQ9Y6H5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SNCAIPQ9Y6H5 MIR4449-201ENST00000578365 66 ntBASIC31.86■■■□□ 2.69
SNCAIPQ9Y6H5 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SNCAIPQ9Y6H5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SNCAIPQ9Y6H5 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.83■■■□□ 2.69
SNCAIPQ9Y6H5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.83■■■□□ 2.69
SNCAIPQ9Y6H5 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.83■■■□□ 2.69
SNCAIPQ9Y6H5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
SNCAIPQ9Y6H5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
SNCAIPQ9Y6H5 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SNCAIPQ9Y6H5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SNCAIPQ9Y6H5 MIR639-201ENST00000384974 98 ntBASIC31.81■■■□□ 2.68
SNCAIPQ9Y6H5 MIR6090-201ENST00000622481 60 ntBASIC31.81■■■□□ 2.68
SNCAIPQ9Y6H5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SNCAIPQ9Y6H5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.8■■■□□ 2.68
SNCAIPQ9Y6H5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SNCAIPQ9Y6H5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SNCAIPQ9Y6H5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.78■■■□□ 2.68
SNCAIPQ9Y6H5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.78■■■□□ 2.68
SNCAIPQ9Y6H5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SNCAIPQ9Y6H5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.76■■■□□ 2.67
SNCAIPQ9Y6H5 AC108673.1-201ENST00000510422 1159 ntBASIC31.75■■■□□ 2.67
SNCAIPQ9Y6H5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.75■■■□□ 2.67
SNCAIPQ9Y6H5 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SNCAIPQ9Y6H5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.73■■■□□ 2.67
SNCAIPQ9Y6H5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms