Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGA11Q9Y5H2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGA11Q9Y5H2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGA11Q9Y5H2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGA11Q9Y5H2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGA11Q9Y5H2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.24■■□□□ 1.79
PCDHGA11Q9Y5H2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.23■■□□□ 1.79
PCDHGA11Q9Y5H2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGA11Q9Y5H2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHGA11Q9Y5H2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHGA11Q9Y5H2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHGA11Q9Y5H2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.18■■□□□ 1.78
PCDHGA11Q9Y5H2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDHGA11Q9Y5H2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGA11Q9Y5H2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.16■■□□□ 1.78
PCDHGA11Q9Y5H2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGA11Q9Y5H2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGA11Q9Y5H2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHGA11Q9Y5H2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHGA11Q9Y5H2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.13■■□□□ 1.77
PCDHGA11Q9Y5H2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
PCDHGA11Q9Y5H2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHGA11Q9Y5H2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGA11Q9Y5H2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.1■■□□□ 1.77
PCDHGA11Q9Y5H2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGA11Q9Y5H2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGA11Q9Y5H2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGA11Q9Y5H2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHGA11Q9Y5H2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.07■■□□□ 1.76
PCDHGA11Q9Y5H2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.07■■□□□ 1.76
PCDHGA11Q9Y5H2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHGA11Q9Y5H2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHGA11Q9Y5H2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHGA11Q9Y5H2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.05■■□□□ 1.76
PCDHGA11Q9Y5H2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGA11Q9Y5H2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGA11Q9Y5H2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.01■■□□□ 1.75
PCDHGA11Q9Y5H2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHGA11Q9Y5H2 AL133380.1-201ENST00000506013 324 ntBASIC26■■□□□ 1.75
PCDHGA11Q9Y5H2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26■■□□□ 1.75
PCDHGA11Q9Y5H2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGA11Q9Y5H2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGA11Q9Y5H2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.97■■□□□ 1.75
PCDHGA11Q9Y5H2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.96■■□□□ 1.75
PCDHGA11Q9Y5H2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.96■■□□□ 1.75
PCDHGA11Q9Y5H2 RARRES2P7-201ENST00000567349 469 ntBASIC25.96■■□□□ 1.75
PCDHGA11Q9Y5H2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGA11Q9Y5H2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGA11Q9Y5H2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGA11Q9Y5H2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCDHGA11Q9Y5H2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGA11Q9Y5H2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
PCDHGA11Q9Y5H2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHGA11Q9Y5H2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHGA11Q9Y5H2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHGA11Q9Y5H2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDHGA11Q9Y5H2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.91■■□□□ 1.74
PCDHGA11Q9Y5H2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHGA11Q9Y5H2 WASH5P-204ENST00000632292 975 ntBASIC25.91■■□□□ 1.74
PCDHGA11Q9Y5H2 AL161658.1-201ENST00000623641 1967 ntBASIC25.9■■□□□ 1.74
PCDHGA11Q9Y5H2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHGA11Q9Y5H2 ABCB10P1-201ENST00000614297 2181 ntBASIC25.89■■□□□ 1.73
PCDHGA11Q9Y5H2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHGA11Q9Y5H2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHGA11Q9Y5H2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHGA11Q9Y5H2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGA11Q9Y5H2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGA11Q9Y5H2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGA11Q9Y5H2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHGA11Q9Y5H2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHGA11Q9Y5H2 SETD8P1-201ENST00000623146 1180 ntBASIC25.86■■□□□ 1.73
PCDHGA11Q9Y5H2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHGA11Q9Y5H2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
PCDHGA11Q9Y5H2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHGA11Q9Y5H2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHGA11Q9Y5H2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGA11Q9Y5H2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGA11Q9Y5H2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.72
PCDHGA11Q9Y5H2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHGA11Q9Y5H2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHGA11Q9Y5H2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
PCDHGA11Q9Y5H2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHGA11Q9Y5H2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHGA11Q9Y5H2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGA11Q9Y5H2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGA11Q9Y5H2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.79■■□□□ 1.72
PCDHGA11Q9Y5H2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
PCDHGA11Q9Y5H2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHGA11Q9Y5H2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHGA11Q9Y5H2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHGA11Q9Y5H2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.75■■□□□ 1.71
PCDHGA11Q9Y5H2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGA11Q9Y5H2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDHGA11Q9Y5H2 ABCB10P3-201ENST00000561950 2166 ntBASIC25.74■■□□□ 1.71
PCDHGA11Q9Y5H2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGA11Q9Y5H2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGA11Q9Y5H2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHGA11Q9Y5H2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
PCDHGA11Q9Y5H2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.73■■□□□ 1.71
PCDHGA11Q9Y5H2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms