Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
MKRN1Q9UHC7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC33.45■■■□□ 2.95
MKRN1Q9UHC7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC33.45■■■□□ 2.95
MKRN1Q9UHC7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC33.44■■■□□ 2.94
MKRN1Q9UHC7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
MKRN1Q9UHC7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC33.43■■■□□ 2.94
MKRN1Q9UHC7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC33.4■■■□□ 2.94
MKRN1Q9UHC7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC33.38■■■□□ 2.93
MKRN1Q9UHC7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
MKRN1Q9UHC7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
MKRN1Q9UHC7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC33.36■■■□□ 2.93
MKRN1Q9UHC7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC33.36■■■□□ 2.93
MKRN1Q9UHC7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC33.35■■■□□ 2.93
MKRN1Q9UHC7 HSD17B1P1-201ENST00000590052 955 ntBASIC33.34■■■□□ 2.93
MKRN1Q9UHC7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
MKRN1Q9UHC7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
MKRN1Q9UHC7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC33.31■■■□□ 2.92
MKRN1Q9UHC7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
MKRN1Q9UHC7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC33.29■■■□□ 2.92
MKRN1Q9UHC7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC33.28■■■□□ 2.92
MKRN1Q9UHC7 MIR639-201ENST00000384974 98 ntBASIC33.28■■■□□ 2.92
MKRN1Q9UHC7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
MKRN1Q9UHC7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
MKRN1Q9UHC7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
MKRN1Q9UHC7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
MKRN1Q9UHC7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
MKRN1Q9UHC7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC33.24■■■□□ 2.91
MKRN1Q9UHC7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC33.22■■■□□ 2.91
MKRN1Q9UHC7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC33.22■■■□□ 2.91
MKRN1Q9UHC7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
MKRN1Q9UHC7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
MKRN1Q9UHC7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC33.2■■■□□ 2.91
MKRN1Q9UHC7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC33.2■■■□□ 2.91
MKRN1Q9UHC7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC33.2■■■□□ 2.91
MKRN1Q9UHC7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC33.2■■■□□ 2.91
MKRN1Q9UHC7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
MKRN1Q9UHC7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
MKRN1Q9UHC7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
MKRN1Q9UHC7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC33.17■■■□□ 2.9
MKRN1Q9UHC7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC33.17■■■□□ 2.9
MKRN1Q9UHC7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC33.17■■■□□ 2.9
MKRN1Q9UHC7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
MKRN1Q9UHC7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
MKRN1Q9UHC7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC33.14■■■□□ 2.9
MKRN1Q9UHC7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC33.14■■■□□ 2.9
MKRN1Q9UHC7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC33.07■■■□□ 2.88
MKRN1Q9UHC7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
MKRN1Q9UHC7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC33.06■■■□□ 2.88
MKRN1Q9UHC7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC33.05■■■□□ 2.88
MKRN1Q9UHC7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
MKRN1Q9UHC7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC33.03■■■□□ 2.88
MKRN1Q9UHC7 DUX4L29-201ENST00000425409 679 ntBASIC33.03■■■□□ 2.88
MKRN1Q9UHC7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC33.02■■■□□ 2.88
MKRN1Q9UHC7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC33■■■□□ 2.87
MKRN1Q9UHC7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC33■■■□□ 2.87
MKRN1Q9UHC7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
MKRN1Q9UHC7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
MKRN1Q9UHC7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
MKRN1Q9UHC7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
MKRN1Q9UHC7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
MKRN1Q9UHC7 AC016575.1-201ENST00000607026 382 ntBASIC32.97■■■□□ 2.87
MKRN1Q9UHC7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
MKRN1Q9UHC7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
MKRN1Q9UHC7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
MKRN1Q9UHC7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.95■■■□□ 2.87
MKRN1Q9UHC7 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.93■■■□□ 2.86
MKRN1Q9UHC7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
MKRN1Q9UHC7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
MKRN1Q9UHC7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
MKRN1Q9UHC7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.89■■■□□ 2.86
MKRN1Q9UHC7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.89■■■□□ 2.86
MKRN1Q9UHC7 MIR3648-2-201ENST00000581792 180 ntBASIC32.89■■■□□ 2.86
MKRN1Q9UHC7 MIR3648-1-201ENST00000615959 180 ntBASIC32.89■■■□□ 2.86
MKRN1Q9UHC7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC32.88■■■□□ 2.85
MKRN1Q9UHC7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
MKRN1Q9UHC7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.88■■■□□ 2.85
MKRN1Q9UHC7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
MKRN1Q9UHC7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
MKRN1Q9UHC7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.85■■■□□ 2.85
MKRN1Q9UHC7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
MKRN1Q9UHC7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
MKRN1Q9UHC7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
MKRN1Q9UHC7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.84■■■□□ 2.85
MKRN1Q9UHC7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
MKRN1Q9UHC7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.83■■■□□ 2.85
MKRN1Q9UHC7 AC021231.2-201ENST00000594613 730 ntBASIC32.82■■■□□ 2.84
MKRN1Q9UHC7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
MKRN1Q9UHC7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.8■■■□□ 2.84
MKRN1Q9UHC7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
MKRN1Q9UHC7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
MKRN1Q9UHC7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.77■■■□□ 2.84
MKRN1Q9UHC7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.77■■■□□ 2.84
MKRN1Q9UHC7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
MKRN1Q9UHC7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.76■■■□□ 2.83
MKRN1Q9UHC7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
MKRN1Q9UHC7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
MKRN1Q9UHC7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
MKRN1Q9UHC7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
MKRN1Q9UHC7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
MKRN1Q9UHC7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms