Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MAP1LC3AQ9H492 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MAP1LC3AQ9H492 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MAP1LC3AQ9H492 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MAP1LC3AQ9H492 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MAP1LC3AQ9H492 AC139426.1-201ENST00000568218 2529 ntBASIC19.8■□□□□ 0.76
MAP1LC3AQ9H492 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MAP1LC3AQ9H492 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MAP1LC3AQ9H492 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.78■□□□□ 0.76
MAP1LC3AQ9H492 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.78■□□□□ 0.76
MAP1LC3AQ9H492 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
MAP1LC3AQ9H492 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MAP1LC3AQ9H492 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.75■□□□□ 0.75
MAP1LC3AQ9H492 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
MAP1LC3AQ9H492 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MAP1LC3AQ9H492 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MAP1LC3AQ9H492 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MAP1LC3AQ9H492 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MAP1LC3AQ9H492 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.73■□□□□ 0.75
MAP1LC3AQ9H492 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
MAP1LC3AQ9H492 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MAP1LC3AQ9H492 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MAP1LC3AQ9H492 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
MAP1LC3AQ9H492 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
MAP1LC3AQ9H492 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
MAP1LC3AQ9H492 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MAP1LC3AQ9H492 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.7■□□□□ 0.74
MAP1LC3AQ9H492 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MAP1LC3AQ9H492 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MAP1LC3AQ9H492 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MAP1LC3AQ9H492 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MAP1LC3AQ9H492 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MAP1LC3AQ9H492 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MAP1LC3AQ9H492 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
MAP1LC3AQ9H492 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MAP1LC3AQ9H492 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MAP1LC3AQ9H492 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.67■□□□□ 0.74
MAP1LC3AQ9H492 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MAP1LC3AQ9H492 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MAP1LC3AQ9H492 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MAP1LC3AQ9H492 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
MAP1LC3AQ9H492 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MAP1LC3AQ9H492 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MAP1LC3AQ9H492 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MAP1LC3AQ9H492 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MAP1LC3AQ9H492 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MAP1LC3AQ9H492 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MAP1LC3AQ9H492 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MAP1LC3AQ9H492 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MAP1LC3AQ9H492 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MAP1LC3AQ9H492 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
MAP1LC3AQ9H492 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
MAP1LC3AQ9H492 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
MAP1LC3AQ9H492 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
MAP1LC3AQ9H492 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
MAP1LC3AQ9H492 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
MAP1LC3AQ9H492 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.57■□□□□ 0.72
MAP1LC3AQ9H492 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MAP1LC3AQ9H492 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
MAP1LC3AQ9H492 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
MAP1LC3AQ9H492 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MAP1LC3AQ9H492 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MAP1LC3AQ9H492 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.56■□□□□ 0.72
MAP1LC3AQ9H492 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.56■□□□□ 0.72
MAP1LC3AQ9H492 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MAP1LC3AQ9H492 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MAP1LC3AQ9H492 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.54■□□□□ 0.72
MAP1LC3AQ9H492 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.54■□□□□ 0.72
MAP1LC3AQ9H492 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MAP1LC3AQ9H492 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MAP1LC3AQ9H492 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MAP1LC3AQ9H492 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MAP1LC3AQ9H492 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MAP1LC3AQ9H492 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MAP1LC3AQ9H492 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MAP1LC3AQ9H492 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MAP1LC3AQ9H492 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MAP1LC3AQ9H492 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.51■□□□□ 0.71
MAP1LC3AQ9H492 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MAP1LC3AQ9H492 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MAP1LC3AQ9H492 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MAP1LC3AQ9H492 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.5■□□□□ 0.71
MAP1LC3AQ9H492 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MAP1LC3AQ9H492 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
MAP1LC3AQ9H492 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
MAP1LC3AQ9H492 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.48■□□□□ 0.71
MAP1LC3AQ9H492 ST7-AS1-201ENST00000456775 1889 ntBASIC19.48■□□□□ 0.71
MAP1LC3AQ9H492 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MAP1LC3AQ9H492 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MAP1LC3AQ9H492 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MAP1LC3AQ9H492 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.47■□□□□ 0.71
MAP1LC3AQ9H492 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MAP1LC3AQ9H492 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
MAP1LC3AQ9H492 AC142086.6-201ENST00000621154 1765 ntBASIC19.47■□□□□ 0.71
MAP1LC3AQ9H492 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MAP1LC3AQ9H492 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.46■□□□□ 0.71
MAP1LC3AQ9H492 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.45■□□□□ 0.7
MAP1LC3AQ9H492 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.45■□□□□ 0.7
MAP1LC3AQ9H492 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MAP1LC3AQ9H492 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms