Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
UBQLN3Q9H347 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
UBQLN3Q9H347 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.13■■□□□ 1.61
UBQLN3Q9H347 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
UBQLN3Q9H347 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
UBQLN3Q9H347 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
UBQLN3Q9H347 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
UBQLN3Q9H347 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.11■■□□□ 1.61
UBQLN3Q9H347 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.1■■□□□ 1.61
UBQLN3Q9H347 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.1■■□□□ 1.61
UBQLN3Q9H347 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
UBQLN3Q9H347 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
UBQLN3Q9H347 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.08■■□□□ 1.61
UBQLN3Q9H347 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
UBQLN3Q9H347 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
UBQLN3Q9H347 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
UBQLN3Q9H347 SUZ12P1-203ENST00000578195 985 ntBASIC25.05■■□□□ 1.6
UBQLN3Q9H347 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
UBQLN3Q9H347 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.04■■□□□ 1.6
UBQLN3Q9H347 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
UBQLN3Q9H347 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
UBQLN3Q9H347 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.04■■□□□ 1.6
UBQLN3Q9H347 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
UBQLN3Q9H347 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.03■■□□□ 1.6
UBQLN3Q9H347 CAHM-201ENST00000604200 896 ntBASIC25.03■■□□□ 1.6
UBQLN3Q9H347 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
UBQLN3Q9H347 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
UBQLN3Q9H347 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.01■■□□□ 1.59
UBQLN3Q9H347 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
UBQLN3Q9H347 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25■■□□□ 1.59
UBQLN3Q9H347 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
UBQLN3Q9H347 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25■■□□□ 1.59
UBQLN3Q9H347 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
UBQLN3Q9H347 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.98■■□□□ 1.59
UBQLN3Q9H347 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
UBQLN3Q9H347 AC120057.4-201ENST00000624722 1615 ntBASIC24.97■■□□□ 1.59
UBQLN3Q9H347 AL391121.1-201ENST00000607967 1349 ntBASIC24.97■■□□□ 1.59
UBQLN3Q9H347 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
UBQLN3Q9H347 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
UBQLN3Q9H347 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
UBQLN3Q9H347 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
UBQLN3Q9H347 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.92■■□□□ 1.58
UBQLN3Q9H347 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
UBQLN3Q9H347 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
UBQLN3Q9H347 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
UBQLN3Q9H347 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
UBQLN3Q9H347 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
UBQLN3Q9H347 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
UBQLN3Q9H347 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
UBQLN3Q9H347 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
UBQLN3Q9H347 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
UBQLN3Q9H347 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
UBQLN3Q9H347 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.87■■□□□ 1.57
UBQLN3Q9H347 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
UBQLN3Q9H347 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
UBQLN3Q9H347 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.86■■□□□ 1.57
UBQLN3Q9H347 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.86■■□□□ 1.57
UBQLN3Q9H347 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
UBQLN3Q9H347 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
UBQLN3Q9H347 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.85■■□□□ 1.57
UBQLN3Q9H347 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
UBQLN3Q9H347 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
UBQLN3Q9H347 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
UBQLN3Q9H347 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
UBQLN3Q9H347 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
UBQLN3Q9H347 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
UBQLN3Q9H347 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.82■■□□□ 1.56
UBQLN3Q9H347 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
UBQLN3Q9H347 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
UBQLN3Q9H347 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.79■■□□□ 1.56
UBQLN3Q9H347 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
UBQLN3Q9H347 WASH5P-204ENST00000632292 975 ntBASIC24.78■■□□□ 1.56
UBQLN3Q9H347 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
UBQLN3Q9H347 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
UBQLN3Q9H347 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
UBQLN3Q9H347 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
UBQLN3Q9H347 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
UBQLN3Q9H347 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
UBQLN3Q9H347 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
UBQLN3Q9H347 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
UBQLN3Q9H347 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBQLN3Q9H347 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBQLN3Q9H347 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.75■■□□□ 1.55
UBQLN3Q9H347 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
UBQLN3Q9H347 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.73■■□□□ 1.55
UBQLN3Q9H347 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.72■■□□□ 1.55
UBQLN3Q9H347 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
UBQLN3Q9H347 ABCB10P1-201ENST00000614297 2181 ntBASIC24.71■■□□□ 1.55
UBQLN3Q9H347 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
UBQLN3Q9H347 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
UBQLN3Q9H347 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
UBQLN3Q9H347 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
UBQLN3Q9H347 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
UBQLN3Q9H347 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.67■■□□□ 1.54
UBQLN3Q9H347 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBQLN3Q9H347 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBQLN3Q9H347 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
UBQLN3Q9H347 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
UBQLN3Q9H347 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.66■■□□□ 1.54
UBQLN3Q9H347 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms