Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MBD3L1Q8WWY6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MBD3L1Q8WWY6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.45■■□□□ 1.02
MBD3L1Q8WWY6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MBD3L1Q8WWY6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.43■■□□□ 1.02
MBD3L1Q8WWY6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.41■■□□□ 1.02
MBD3L1Q8WWY6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MBD3L1Q8WWY6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MBD3L1Q8WWY6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
MBD3L1Q8WWY6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
MBD3L1Q8WWY6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MBD3L1Q8WWY6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
MBD3L1Q8WWY6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MBD3L1Q8WWY6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.39■■□□□ 1.01
MBD3L1Q8WWY6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD3L1Q8WWY6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD3L1Q8WWY6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD3L1Q8WWY6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MBD3L1Q8WWY6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MBD3L1Q8WWY6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD3L1Q8WWY6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD3L1Q8WWY6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.35■■□□□ 1.01
MBD3L1Q8WWY6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.35■■□□□ 1.01
MBD3L1Q8WWY6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.34■■□□□ 1.01
MBD3L1Q8WWY6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MBD3L1Q8WWY6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MBD3L1Q8WWY6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3L1Q8WWY6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.32■■□□□ 1
MBD3L1Q8WWY6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MBD3L1Q8WWY6 ST7-AS1-201ENST00000456775 1889 ntBASIC21.31■■□□□ 1
MBD3L1Q8WWY6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.3■■□□□ 1
MBD3L1Q8WWY6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
MBD3L1Q8WWY6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
MBD3L1Q8WWY6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.29■■□□□ 1
MBD3L1Q8WWY6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
MBD3L1Q8WWY6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.29■■□□□ 1
MBD3L1Q8WWY6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MBD3L1Q8WWY6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
MBD3L1Q8WWY6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.28■■□□□ 1
MBD3L1Q8WWY6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
MBD3L1Q8WWY6 AC142086.6-201ENST00000621154 1765 ntBASIC21.28■■□□□ 1
MBD3L1Q8WWY6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.28■■□□□ 1
MBD3L1Q8WWY6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MBD3L1Q8WWY6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
MBD3L1Q8WWY6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
MBD3L1Q8WWY6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MBD3L1Q8WWY6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
MBD3L1Q8WWY6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3L1Q8WWY6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3L1Q8WWY6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3L1Q8WWY6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3L1Q8WWY6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3L1Q8WWY6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.25■□□□□ 0.99
MBD3L1Q8WWY6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3L1Q8WWY6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3L1Q8WWY6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MBD3L1Q8WWY6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MBD3L1Q8WWY6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MBD3L1Q8WWY6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.22■□□□□ 0.99
MBD3L1Q8WWY6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MBD3L1Q8WWY6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MBD3L1Q8WWY6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MBD3L1Q8WWY6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MBD3L1Q8WWY6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
MBD3L1Q8WWY6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3L1Q8WWY6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3L1Q8WWY6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3L1Q8WWY6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3L1Q8WWY6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3L1Q8WWY6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MBD3L1Q8WWY6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3L1Q8WWY6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
MBD3L1Q8WWY6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
MBD3L1Q8WWY6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MBD3L1Q8WWY6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
MBD3L1Q8WWY6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.13■□□□□ 0.97
MBD3L1Q8WWY6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
MBD3L1Q8WWY6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MBD3L1Q8WWY6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
MBD3L1Q8WWY6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3L1Q8WWY6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MBD3L1Q8WWY6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MBD3L1Q8WWY6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3L1Q8WWY6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MBD3L1Q8WWY6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
MBD3L1Q8WWY6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
MBD3L1Q8WWY6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MBD3L1Q8WWY6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.09■□□□□ 0.97
MBD3L1Q8WWY6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MBD3L1Q8WWY6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
MBD3L1Q8WWY6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC21.08■□□□□ 0.97
MBD3L1Q8WWY6 AC015813.7-201ENST00000623294 581 ntBASIC21.08■□□□□ 0.97
MBD3L1Q8WWY6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MBD3L1Q8WWY6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
MBD3L1Q8WWY6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MBD3L1Q8WWY6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MBD3L1Q8WWY6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
MBD3L1Q8WWY6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MBD3L1Q8WWY6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
MBD3L1Q8WWY6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms