Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
ZC3HC1Q86WB0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ZC3HC1Q86WB0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ZC3HC1Q86WB0 ABCB10P1-201ENST00000614297 2181 ntBASIC27.06■■□□□ 1.92
ZC3HC1Q86WB0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ZC3HC1Q86WB0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ZC3HC1Q86WB0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
ZC3HC1Q86WB0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.04■■□□□ 1.92
ZC3HC1Q86WB0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
ZC3HC1Q86WB0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3HC1Q86WB0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
ZC3HC1Q86WB0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.02■■□□□ 1.92
ZC3HC1Q86WB0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
ZC3HC1Q86WB0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
ZC3HC1Q86WB0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27■■□□□ 1.91
ZC3HC1Q86WB0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.99■■□□□ 1.91
ZC3HC1Q86WB0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ZC3HC1Q86WB0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
ZC3HC1Q86WB0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
ZC3HC1Q86WB0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.97■■□□□ 1.91
ZC3HC1Q86WB0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ZC3HC1Q86WB0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.96■■□□□ 1.91
ZC3HC1Q86WB0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
ZC3HC1Q86WB0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.95■■□□□ 1.91
ZC3HC1Q86WB0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
ZC3HC1Q86WB0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
ZC3HC1Q86WB0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.93■■□□□ 1.9
ZC3HC1Q86WB0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.93■■□□□ 1.9
ZC3HC1Q86WB0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
ZC3HC1Q86WB0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
ZC3HC1Q86WB0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
ZC3HC1Q86WB0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZC3HC1Q86WB0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
ZC3HC1Q86WB0 AL161658.1-201ENST00000623641 1967 ntBASIC26.89■■□□□ 1.89
ZC3HC1Q86WB0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
ZC3HC1Q86WB0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
ZC3HC1Q86WB0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ZC3HC1Q86WB0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.87■■□□□ 1.89
ZC3HC1Q86WB0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ZC3HC1Q86WB0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.87■■□□□ 1.89
ZC3HC1Q86WB0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.87■■□□□ 1.89
ZC3HC1Q86WB0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
ZC3HC1Q86WB0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ZC3HC1Q86WB0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
ZC3HC1Q86WB0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ZC3HC1Q86WB0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ZC3HC1Q86WB0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
ZC3HC1Q86WB0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
ZC3HC1Q86WB0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.88
ZC3HC1Q86WB0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3HC1Q86WB0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3HC1Q86WB0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
ZC3HC1Q86WB0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3HC1Q86WB0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3HC1Q86WB0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3HC1Q86WB0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.8■■□□□ 1.88
ZC3HC1Q86WB0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZC3HC1Q86WB0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3HC1Q86WB0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.78■■□□□ 1.88
ZC3HC1Q86WB0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZC3HC1Q86WB0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
ZC3HC1Q86WB0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZC3HC1Q86WB0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.77■■□□□ 1.88
ZC3HC1Q86WB0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3HC1Q86WB0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3HC1Q86WB0 ABCB10P3-201ENST00000561950 2166 ntBASIC26.76■■□□□ 1.87
ZC3HC1Q86WB0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3HC1Q86WB0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ZC3HC1Q86WB0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ZC3HC1Q86WB0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.75■■□□□ 1.87
ZC3HC1Q86WB0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZC3HC1Q86WB0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZC3HC1Q86WB0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
ZC3HC1Q86WB0 ST7-AS1-201ENST00000456775 1889 ntBASIC26.73■■□□□ 1.87
ZC3HC1Q86WB0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZC3HC1Q86WB0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZC3HC1Q86WB0 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZC3HC1Q86WB0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZC3HC1Q86WB0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ZC3HC1Q86WB0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ZC3HC1Q86WB0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.71■■□□□ 1.87
ZC3HC1Q86WB0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ZC3HC1Q86WB0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ZC3HC1Q86WB0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ZC3HC1Q86WB0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
ZC3HC1Q86WB0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
ZC3HC1Q86WB0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.7■■□□□ 1.86
ZC3HC1Q86WB0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZC3HC1Q86WB0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ZC3HC1Q86WB0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.67■■□□□ 1.86
ZC3HC1Q86WB0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ZC3HC1Q86WB0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
ZC3HC1Q86WB0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.66■■□□□ 1.86
ZC3HC1Q86WB0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.65■■□□□ 1.86
ZC3HC1Q86WB0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
ZC3HC1Q86WB0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ZC3HC1Q86WB0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ZC3HC1Q86WB0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
ZC3HC1Q86WB0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.64■■□□□ 1.86
ZC3HC1Q86WB0 AL133380.1-201ENST00000506013 324 ntBASIC26.64■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms