Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC39.42■■■■□ 3.9
RPGRIP1LQ68CZ1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
RPGRIP1LQ68CZ1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
RPGRIP1LQ68CZ1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC39.37■■■■□ 3.89
RPGRIP1LQ68CZ1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC39.33■■■■□ 3.89
RPGRIP1LQ68CZ1 MIR7108-201ENST00000614319 87 ntBASIC39.31■■■■□ 3.88
RPGRIP1LQ68CZ1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC39.31■■■■□ 3.88
RPGRIP1LQ68CZ1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
RPGRIP1LQ68CZ1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
RPGRIP1LQ68CZ1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
RPGRIP1LQ68CZ1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
RPGRIP1LQ68CZ1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC39.27■■■■□ 3.88
RPGRIP1LQ68CZ1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
RPGRIP1LQ68CZ1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC39.27■■■■□ 3.88
RPGRIP1LQ68CZ1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
RPGRIP1LQ68CZ1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
RPGRIP1LQ68CZ1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC39.25■■■■□ 3.87
RPGRIP1LQ68CZ1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC39.24■■■■□ 3.87
RPGRIP1LQ68CZ1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC39.21■■■■□ 3.87
RPGRIP1LQ68CZ1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC39.21■■■■□ 3.87
RPGRIP1LQ68CZ1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC39.21■■■■□ 3.87
RPGRIP1LQ68CZ1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC39.2■■■■□ 3.87
RPGRIP1LQ68CZ1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
RPGRIP1LQ68CZ1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
RPGRIP1LQ68CZ1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
RPGRIP1LQ68CZ1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC39.18■■■■□ 3.86
RPGRIP1LQ68CZ1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
RPGRIP1LQ68CZ1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
RPGRIP1LQ68CZ1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
RPGRIP1LQ68CZ1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
RPGRIP1LQ68CZ1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
RPGRIP1LQ68CZ1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC39.14■■■■□ 3.86
RPGRIP1LQ68CZ1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
RPGRIP1LQ68CZ1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
RPGRIP1LQ68CZ1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC39.12■■■■□ 3.85
RPGRIP1LQ68CZ1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
RPGRIP1LQ68CZ1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC39.12■■■■□ 3.85
RPGRIP1LQ68CZ1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC39.1■■■■□ 3.85
RPGRIP1LQ68CZ1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC39.1■■■■□ 3.85
RPGRIP1LQ68CZ1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
RPGRIP1LQ68CZ1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC39.09■■■■□ 3.85
RPGRIP1LQ68CZ1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC39.09■■■■□ 3.85
RPGRIP1LQ68CZ1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC39.08■■■■□ 3.85
RPGRIP1LQ68CZ1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
RPGRIP1LQ68CZ1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
RPGRIP1LQ68CZ1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
RPGRIP1LQ68CZ1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC39.05■■■■□ 3.84
RPGRIP1LQ68CZ1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC39.04■■■■□ 3.84
RPGRIP1LQ68CZ1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC39.04■■■■□ 3.84
RPGRIP1LQ68CZ1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC39.03■■■■□ 3.84
RPGRIP1LQ68CZ1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
RPGRIP1LQ68CZ1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC39.01■■■■□ 3.84
RPGRIP1LQ68CZ1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
RPGRIP1LQ68CZ1 ZNRF2P2-203ENST00000454624 420 ntBASIC39.01■■■■□ 3.84
RPGRIP1LQ68CZ1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC39■■■■□ 3.83
RPGRIP1LQ68CZ1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC38.99■■■■□ 3.83
RPGRIP1LQ68CZ1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC38.98■■■■□ 3.83
RPGRIP1LQ68CZ1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC38.97■■■■□ 3.83
RPGRIP1LQ68CZ1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC38.97■■■■□ 3.83
RPGRIP1LQ68CZ1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC38.95■■■■□ 3.83
RPGRIP1LQ68CZ1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC38.95■■■■□ 3.83
RPGRIP1LQ68CZ1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC38.94■■■■□ 3.82
RPGRIP1LQ68CZ1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC38.93■■■■□ 3.82
RPGRIP1LQ68CZ1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
RPGRIP1LQ68CZ1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC38.9■■■■□ 3.82
RPGRIP1LQ68CZ1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC38.9■■■■□ 3.82
RPGRIP1LQ68CZ1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
RPGRIP1LQ68CZ1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
RPGRIP1LQ68CZ1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC38.88■■■■□ 3.81
RPGRIP1LQ68CZ1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC38.86■■■■□ 3.81
RPGRIP1LQ68CZ1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC38.86■■■■□ 3.81
RPGRIP1LQ68CZ1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC38.86■■■■□ 3.81
RPGRIP1LQ68CZ1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
RPGRIP1LQ68CZ1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC38.85■■■■□ 3.81
RPGRIP1LQ68CZ1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
RPGRIP1LQ68CZ1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
RPGRIP1LQ68CZ1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC38.83■■■■□ 3.81
RPGRIP1LQ68CZ1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC38.83■■■■□ 3.81
RPGRIP1LQ68CZ1 DUX4L29-201ENST00000425409 679 ntBASIC38.83■■■■□ 3.81
RPGRIP1LQ68CZ1 HLA-V-202ENST00000446817 847 ntBASIC38.83■■■■□ 3.81
RPGRIP1LQ68CZ1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
RPGRIP1LQ68CZ1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
RPGRIP1LQ68CZ1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
RPGRIP1LQ68CZ1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC38.81■■■■□ 3.8
RPGRIP1LQ68CZ1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC38.81■■■■□ 3.8
RPGRIP1LQ68CZ1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
RPGRIP1LQ68CZ1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC38.77■■■■□ 3.8
RPGRIP1LQ68CZ1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC38.77■■■■□ 3.8
RPGRIP1LQ68CZ1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
RPGRIP1LQ68CZ1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC38.75■■■■□ 3.79
RPGRIP1LQ68CZ1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC38.74■■■■□ 3.79
RPGRIP1LQ68CZ1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC38.74■■■■□ 3.79
RPGRIP1LQ68CZ1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
RPGRIP1LQ68CZ1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC38.74■■■■□ 3.79
RPGRIP1LQ68CZ1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC38.74■■■■□ 3.79
RPGRIP1LQ68CZ1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC38.73■■■■□ 3.79
RPGRIP1LQ68CZ1 AC021231.2-201ENST00000594613 730 ntBASIC38.73■■■■□ 3.79
RPGRIP1LQ68CZ1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC38.72■■■■□ 3.79
RPGRIP1LQ68CZ1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC38.72■■■■□ 3.79
RPGRIP1LQ68CZ1 AC108673.1-201ENST00000510422 1159 ntBASIC38.72■■■■□ 3.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms