Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.31■■■□□ 2.6
CAPN2P17655 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CAPN2P17655 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CAPN2P17655 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.29■■■□□ 2.6
CAPN2P17655 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
CAPN2P17655 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CAPN2P17655 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
CAPN2P17655 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
CAPN2P17655 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CAPN2P17655 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
CAPN2P17655 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CAPN2P17655 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.27■■■□□ 2.6
CAPN2P17655 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.24■■■□□ 2.59
CAPN2P17655 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CAPN2P17655 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.23■■■□□ 2.59
CAPN2P17655 MIR639-201ENST00000384974 98 ntBASIC31.21■■■□□ 2.59
CAPN2P17655 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CAPN2P17655 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CAPN2P17655 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CAPN2P17655 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.19■■■□□ 2.58
CAPN2P17655 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CAPN2P17655 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
CAPN2P17655 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CAPN2P17655 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CAPN2P17655 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.15■■■□□ 2.58
CAPN2P17655 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CAPN2P17655 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CAPN2P17655 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.13■■■□□ 2.57
CAPN2P17655 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.13■■■□□ 2.57
CAPN2P17655 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.12■■■□□ 2.57
CAPN2P17655 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
CAPN2P17655 DUX4L29-201ENST00000425409 679 ntBASIC31.12■■■□□ 2.57
CAPN2P17655 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
CAPN2P17655 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CAPN2P17655 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CAPN2P17655 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.08■■■□□ 2.57
CAPN2P17655 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.06■■■□□ 2.56
CAPN2P17655 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CAPN2P17655 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.05■■■□□ 2.56
CAPN2P17655 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CAPN2P17655 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CAPN2P17655 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CAPN2P17655 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.04■■■□□ 2.56
CAPN2P17655 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
CAPN2P17655 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CAPN2P17655 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.03■■■□□ 2.56
CAPN2P17655 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
CAPN2P17655 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CAPN2P17655 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CAPN2P17655 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CAPN2P17655 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.01■■■□□ 2.55
CAPN2P17655 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
CAPN2P17655 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CAPN2P17655 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CAPN2P17655 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.96■■■□□ 2.55
CAPN2P17655 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.95■■■□□ 2.55
CAPN2P17655 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.95■■■□□ 2.55
CAPN2P17655 HSD17B1P1-201ENST00000590052 955 ntBASIC30.94■■■□□ 2.54
CAPN2P17655 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CAPN2P17655 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.93■■■□□ 2.54
CAPN2P17655 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CAPN2P17655 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.89■■■□□ 2.54
CAPN2P17655 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.89■■■□□ 2.54
CAPN2P17655 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CAPN2P17655 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.88■■■□□ 2.53
CAPN2P17655 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
CAPN2P17655 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.87■■■□□ 2.53
CAPN2P17655 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.87■■■□□ 2.53
CAPN2P17655 MIR3648-2-201ENST00000581792 180 ntBASIC30.87■■■□□ 2.53
CAPN2P17655 MIR3648-1-201ENST00000615959 180 ntBASIC30.87■■■□□ 2.53
CAPN2P17655 WASH5P-204ENST00000632292 975 ntBASIC30.87■■■□□ 2.53
CAPN2P17655 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
CAPN2P17655 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.86■■■□□ 2.53
CAPN2P17655 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.83■■■□□ 2.53
CAPN2P17655 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CAPN2P17655 AC021231.2-201ENST00000594613 730 ntBASIC30.83■■■□□ 2.53
CAPN2P17655 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
CAPN2P17655 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CAPN2P17655 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.81■■■□□ 2.52
CAPN2P17655 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.8■■■□□ 2.52
CAPN2P17655 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.8■■■□□ 2.52
CAPN2P17655 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.8■■■□□ 2.52
CAPN2P17655 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.79■■■□□ 2.52
CAPN2P17655 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.79■■■□□ 2.52
CAPN2P17655 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CAPN2P17655 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CAPN2P17655 AC016575.1-201ENST00000607026 382 ntBASIC30.77■■■□□ 2.52
CAPN2P17655 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CAPN2P17655 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.75■■■□□ 2.51
CAPN2P17655 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.75■■■□□ 2.51
CAPN2P17655 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CAPN2P17655 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
CAPN2P17655 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
CAPN2P17655 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CAPN2P17655 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
CAPN2P17655 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.72■■■□□ 2.51
CAPN2P17655 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CAPN2P17655 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
CAPN2P17655 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.72■■■□□ 2.51
CAPN2P17655 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms