Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
GAPDHP04406 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GAPDHP04406 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GAPDHP04406 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
GAPDHP04406 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.55■■□□□ 1.2
GAPDHP04406 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
GAPDHP04406 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
GAPDHP04406 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
GAPDHP04406 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
GAPDHP04406 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
GAPDHP04406 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
GAPDHP04406 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
GAPDHP04406 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
GAPDHP04406 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
GAPDHP04406 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
GAPDHP04406 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.49■■□□□ 1.19
GAPDHP04406 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
GAPDHP04406 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC22.49■■□□□ 1.19
GAPDHP04406 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC22.49■■□□□ 1.19
GAPDHP04406 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
GAPDHP04406 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
GAPDHP04406 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
GAPDHP04406 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
GAPDHP04406 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC22.47■■□□□ 1.19
GAPDHP04406 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
GAPDHP04406 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
GAPDHP04406 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
GAPDHP04406 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
GAPDHP04406 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
GAPDHP04406 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.44■■□□□ 1.18
GAPDHP04406 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.44■■□□□ 1.18
GAPDHP04406 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.43■■□□□ 1.18
GAPDHP04406 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
GAPDHP04406 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
GAPDHP04406 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
GAPDHP04406 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
GAPDHP04406 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
GAPDHP04406 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
GAPDHP04406 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
GAPDHP04406 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
GAPDHP04406 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.4■■□□□ 1.18
GAPDHP04406 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
GAPDHP04406 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.4■■□□□ 1.18
GAPDHP04406 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.39■■□□□ 1.18
GAPDHP04406 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
GAPDHP04406 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.39■■□□□ 1.17
GAPDHP04406 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
GAPDHP04406 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.37■■□□□ 1.17
GAPDHP04406 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.37■■□□□ 1.17
GAPDHP04406 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC22.37■■□□□ 1.17
GAPDHP04406 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.37■■□□□ 1.17
GAPDHP04406 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
GAPDHP04406 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.35■■□□□ 1.17
GAPDHP04406 AC139426.1-201ENST00000568218 2529 ntBASIC22.35■■□□□ 1.17
GAPDHP04406 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GAPDHP04406 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
GAPDHP04406 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
GAPDHP04406 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
GAPDHP04406 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
GAPDHP04406 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.31■■□□□ 1.16
GAPDHP04406 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.31■■□□□ 1.16
GAPDHP04406 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
GAPDHP04406 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
GAPDHP04406 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
GAPDHP04406 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.28■■□□□ 1.16
GAPDHP04406 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.28■■□□□ 1.16
GAPDHP04406 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
GAPDHP04406 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GAPDHP04406 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GAPDHP04406 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
GAPDHP04406 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.25■■□□□ 1.15
GAPDHP04406 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.25■■□□□ 1.15
GAPDHP04406 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GAPDHP04406 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
GAPDHP04406 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.23■■□□□ 1.15
GAPDHP04406 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
GAPDHP04406 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.23■■□□□ 1.15
GAPDHP04406 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GAPDHP04406 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GAPDHP04406 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GAPDHP04406 AC120057.4-201ENST00000624722 1615 ntBASIC22.2■■□□□ 1.15
GAPDHP04406 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC22.2■■□□□ 1.14
GAPDHP04406 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
GAPDHP04406 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
GAPDHP04406 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
GAPDHP04406 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
GAPDHP04406 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GAPDHP04406 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GAPDHP04406 RARRES2P7-201ENST00000567349 469 ntBASIC22.17■■□□□ 1.14
GAPDHP04406 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
GAPDHP04406 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GAPDHP04406 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
GAPDHP04406 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
GAPDHP04406 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GAPDHP04406 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GAPDHP04406 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
GAPDHP04406 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
GAPDHP04406 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
GAPDHP04406 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
GAPDHP04406 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms