Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LTAP01374 AL161658.1-201ENST00000623641 1967 ntBASIC20.52■□□□□ 0.87
LTAP01374 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LTAP01374 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LTAP01374 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LTAP01374 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC20.5■□□□□ 0.87
LTAP01374 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LTAP01374 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LTAP01374 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LTAP01374 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LTAP01374 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LTAP01374 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LTAP01374 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
LTAP01374 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LTAP01374 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LTAP01374 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LTAP01374 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTAP01374 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTAP01374 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.45■□□□□ 0.86
LTAP01374 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LTAP01374 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
LTAP01374 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LTAP01374 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.43■□□□□ 0.86
LTAP01374 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LTAP01374 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LTAP01374 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LTAP01374 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTAP01374 ST7-AS1-201ENST00000456775 1889 ntBASIC20.41■□□□□ 0.86
LTAP01374 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LTAP01374 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LTAP01374 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LTAP01374 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LTAP01374 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.39■□□□□ 0.86
LTAP01374 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LTAP01374 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
LTAP01374 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LTAP01374 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.36■□□□□ 0.85
LTAP01374 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LTAP01374 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.35■□□□□ 0.85
LTAP01374 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LTAP01374 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LTAP01374 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
LTAP01374 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.33■□□□□ 0.85
LTAP01374 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LTAP01374 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.32■□□□□ 0.84
LTAP01374 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LTAP01374 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.31■□□□□ 0.84
LTAP01374 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.31■□□□□ 0.84
LTAP01374 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTAP01374 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.3■□□□□ 0.84
LTAP01374 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LTAP01374 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LTAP01374 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LTAP01374 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTAP01374 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LTAP01374 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.29■□□□□ 0.84
LTAP01374 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LTAP01374 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LTAP01374 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LTAP01374 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LTAP01374 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
LTAP01374 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LTAP01374 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LTAP01374 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LTAP01374 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.24■□□□□ 0.83
LTAP01374 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.24■□□□□ 0.83
LTAP01374 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LTAP01374 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LTAP01374 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.24■□□□□ 0.83
LTAP01374 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LTAP01374 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LTAP01374 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LTAP01374 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LTAP01374 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LTAP01374 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LTAP01374 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LTAP01374 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LTAP01374 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.21■□□□□ 0.83
LTAP01374 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LTAP01374 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.2■□□□□ 0.82
LTAP01374 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LTAP01374 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LTAP01374 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LTAP01374 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LTAP01374 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LTAP01374 AC142086.6-201ENST00000621154 1765 ntBASIC20.18■□□□□ 0.82
LTAP01374 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LTAP01374 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LTAP01374 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LTAP01374 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LTAP01374 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LTAP01374 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LTAP01374 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LTAP01374 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LTAP01374 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LTAP01374 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.16■□□□□ 0.82
LTAP01374 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LTAP01374 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LTAP01374 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LTAP01374 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms