Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TOMM40O96008 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TOMM40O96008 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TOMM40O96008 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TOMM40O96008 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.1■□□□□ 0.97
TOMM40O96008 AP002365.1-201ENST00000603448 772 ntBASIC21.1■□□□□ 0.97
TOMM40O96008 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TOMM40O96008 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.1■□□□□ 0.97
TOMM40O96008 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TOMM40O96008 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TOMM40O96008 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TOMM40O96008 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
TOMM40O96008 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOMM40O96008 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
TOMM40O96008 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TOMM40O96008 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
TOMM40O96008 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.04■□□□□ 0.96
TOMM40O96008 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TOMM40O96008 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TOMM40O96008 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TOMM40O96008 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TOMM40O96008 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TOMM40O96008 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TOMM40O96008 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TOMM40O96008 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TOMM40O96008 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.01■□□□□ 0.95
TOMM40O96008 ABCB10P1-201ENST00000614297 2181 ntBASIC20.99■□□□□ 0.95
TOMM40O96008 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOMM40O96008 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TOMM40O96008 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOMM40O96008 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TOMM40O96008 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
TOMM40O96008 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.96■□□□□ 0.95
TOMM40O96008 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TOMM40O96008 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TOMM40O96008 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOMM40O96008 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOMM40O96008 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TOMM40O96008 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
TOMM40O96008 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
TOMM40O96008 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TOMM40O96008 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TOMM40O96008 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TOMM40O96008 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TOMM40O96008 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TOMM40O96008 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOMM40O96008 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TOMM40O96008 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.9■□□□□ 0.94
TOMM40O96008 ABCB10P3-201ENST00000561950 2166 ntBASIC20.89■□□□□ 0.94
TOMM40O96008 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TOMM40O96008 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TOMM40O96008 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.89■□□□□ 0.93
TOMM40O96008 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TOMM40O96008 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TOMM40O96008 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TOMM40O96008 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TOMM40O96008 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.88■□□□□ 0.93
TOMM40O96008 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TOMM40O96008 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.87■□□□□ 0.93
TOMM40O96008 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.87■□□□□ 0.93
TOMM40O96008 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TOMM40O96008 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOMM40O96008 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TOMM40O96008 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TOMM40O96008 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOMM40O96008 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOMM40O96008 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TOMM40O96008 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
TOMM40O96008 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.84■□□□□ 0.93
TOMM40O96008 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TOMM40O96008 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TOMM40O96008 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TOMM40O96008 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.83■□□□□ 0.93
TOMM40O96008 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.83■□□□□ 0.93
TOMM40O96008 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOMM40O96008 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TOMM40O96008 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOMM40O96008 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOMM40O96008 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TOMM40O96008 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
TOMM40O96008 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.81■□□□□ 0.92
TOMM40O96008 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOMM40O96008 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TOMM40O96008 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TOMM40O96008 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOMM40O96008 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TOMM40O96008 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TOMM40O96008 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
TOMM40O96008 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TOMM40O96008 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TOMM40O96008 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TOMM40O96008 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TOMM40O96008 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TOMM40O96008 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TOMM40O96008 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TOMM40O96008 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOMM40O96008 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOMM40O96008 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TOMM40O96008 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TOMM40O96008 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms