Protein–RNA interactions for Protein: O95405

ZFYVE9, Zinc finger FYVE domain-containing protein 9, humanhuman

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE9O95405 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
ZFYVE9O95405 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
ZFYVE9O95405 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
ZFYVE9O95405 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC39.74■■■■□ 3.95
ZFYVE9O95405 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
ZFYVE9O95405 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
ZFYVE9O95405 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC39.71■■■■□ 3.95
ZFYVE9O95405 ZNRF2P2-203ENST00000454624 420 ntBASIC39.7■■■■□ 3.95
ZFYVE9O95405 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC39.69■■■■□ 3.94
ZFYVE9O95405 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC39.67■■■■□ 3.94
ZFYVE9O95405 BOD1-206ENST00000480951 814 ntTSL 2 BASIC39.67■■■■□ 3.94
ZFYVE9O95405 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
ZFYVE9O95405 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC39.66■■■■□ 3.94
ZFYVE9O95405 WASH5P-204ENST00000632292 975 ntBASIC39.66■■■■□ 3.94
ZFYVE9O95405 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC39.66■■■■□ 3.94
ZFYVE9O95405 HGH1-207ENST00000628266 258 ntTSL 5 BASIC39.63■■■■□ 3.93
ZFYVE9O95405 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
ZFYVE9O95405 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC39.62■■■■□ 3.93
ZFYVE9O95405 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC39.61■■■■□ 3.93
ZFYVE9O95405 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC39.61■■■■□ 3.93
ZFYVE9O95405 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC39.59■■■■□ 3.93
ZFYVE9O95405 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC39.58■■■■□ 3.93
ZFYVE9O95405 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
ZFYVE9O95405 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC39.57■■■■□ 3.92
ZFYVE9O95405 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC39.56■■■■□ 3.92
ZFYVE9O95405 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC39.56■■■■□ 3.92
ZFYVE9O95405 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
ZFYVE9O95405 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC39.55■■■■□ 3.92
ZFYVE9O95405 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC39.54■■■■□ 3.92
ZFYVE9O95405 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
ZFYVE9O95405 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC39.5■■■■□ 3.91
ZFYVE9O95405 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
ZFYVE9O95405 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
ZFYVE9O95405 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC39.48■■■■□ 3.91
ZFYVE9O95405 RPS2-202ENST00000526522 924 ntTSL 2 BASIC39.47■■■■□ 3.91
ZFYVE9O95405 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC39.46■■■■□ 3.91
ZFYVE9O95405 RPS2-209ENST00000529806 993 ntTSL 3 BASIC39.46■■■■□ 3.91
ZFYVE9O95405 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC39.42■■■■□ 3.9
ZFYVE9O95405 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
ZFYVE9O95405 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC39.39■■■■□ 3.9
ZFYVE9O95405 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC39.39■■■■□ 3.9
ZFYVE9O95405 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC39.39■■■■□ 3.9
ZFYVE9O95405 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC39.39■■■■□ 3.9
ZFYVE9O95405 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
ZFYVE9O95405 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC39.38■■■■□ 3.89
ZFYVE9O95405 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC39.38■■■■□ 3.89
ZFYVE9O95405 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
ZFYVE9O95405 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC39.36■■■■□ 3.89
ZFYVE9O95405 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC39.36■■■■□ 3.89
ZFYVE9O95405 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
ZFYVE9O95405 MIR4449-201ENST00000578365 66 ntBASIC39.32■■■■□ 3.89
ZFYVE9O95405 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
ZFYVE9O95405 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
ZFYVE9O95405 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
ZFYVE9O95405 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC39.29■■■■□ 3.88
ZFYVE9O95405 MACF1-219ENST00000484793 834 ntTSL 2 BASIC39.28■■■■□ 3.88
ZFYVE9O95405 DUX4L29-201ENST00000425409 679 ntBASIC39.27■■■■□ 3.88
ZFYVE9O95405 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.87
ZFYVE9O95405 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC39.25■■■■□ 3.87
ZFYVE9O95405 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
ZFYVE9O95405 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
ZFYVE9O95405 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
ZFYVE9O95405 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC39.23■■■■□ 3.87
ZFYVE9O95405 AC021231.2-201ENST00000594613 730 ntBASIC39.23■■■■□ 3.87
ZFYVE9O95405 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC39.22■■■■□ 3.87
ZFYVE9O95405 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC39.22■■■■□ 3.87
ZFYVE9O95405 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC39.21■■■■□ 3.87
ZFYVE9O95405 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC39.2■■■■□ 3.87
ZFYVE9O95405 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
ZFYVE9O95405 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC39.18■■■■□ 3.86
ZFYVE9O95405 MIR639-201ENST00000384974 98 ntBASIC39.18■■■■□ 3.86
ZFYVE9O95405 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC39.17■■■■□ 3.86
ZFYVE9O95405 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC39.16■■■■□ 3.86
ZFYVE9O95405 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
ZFYVE9O95405 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC39.15■■■■□ 3.86
ZFYVE9O95405 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
ZFYVE9O95405 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC39.14■■■■□ 3.86
ZFYVE9O95405 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
ZFYVE9O95405 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
ZFYVE9O95405 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
ZFYVE9O95405 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
ZFYVE9O95405 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC39.11■■■■□ 3.85
ZFYVE9O95405 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC39.1■■■■□ 3.85
ZFYVE9O95405 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC39.1■■■■□ 3.85
ZFYVE9O95405 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
ZFYVE9O95405 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
ZFYVE9O95405 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
ZFYVE9O95405 MIR6090-201ENST00000622481 60 ntBASIC39.02■■■■□ 3.84
ZFYVE9O95405 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC39.01■■■■□ 3.84
ZFYVE9O95405 RNF166-209ENST00000567844 633 ntTSL 5 BASIC39.01■■■■□ 3.84
ZFYVE9O95405 MIR3648-2-201ENST00000581792 180 ntBASIC38.99■■■■□ 3.83
ZFYVE9O95405 MIR3648-1-201ENST00000615959 180 ntBASIC38.99■■■■□ 3.83
ZFYVE9O95405 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC38.99■■■■□ 3.83
ZFYVE9O95405 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
ZFYVE9O95405 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC38.96■■■■□ 3.83
ZFYVE9O95405 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
ZFYVE9O95405 AC016575.1-201ENST00000607026 382 ntBASIC38.96■■■■□ 3.83
ZFYVE9O95405 CR559946.2-201ENST00000623684 991 ntBASIC38.96■■■■□ 3.83
ZFYVE9O95405 CIB2-204ENST00000557846 934 ntTSL 3 BASIC38.95■■■■□ 3.83
ZFYVE9O95405 GDI1-215ENST00000630693 786 ntTSL 4 BASIC38.95■■■■□ 3.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms