Protein–RNA interactions for Protein: O15370

SOX12, Transcription factor SOX-12, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX12O15370 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
SOX12O15370 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
SOX12O15370 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC37.21■■■■□ 3.55
SOX12O15370 WASH5P-204ENST00000632292 975 ntBASIC37.21■■■■□ 3.55
SOX12O15370 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC37.19■■■■□ 3.54
SOX12O15370 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC37.17■■■■□ 3.54
SOX12O15370 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC37.17■■■■□ 3.54
SOX12O15370 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
SOX12O15370 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC37.12■■■■□ 3.53
SOX12O15370 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
SOX12O15370 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
SOX12O15370 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC37.07■■■■□ 3.52
SOX12O15370 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC37.06■■■■□ 3.52
SOX12O15370 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC37.06■■■■□ 3.52
SOX12O15370 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC37.06■■■■□ 3.52
SOX12O15370 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC37.05■■■■□ 3.52
SOX12O15370 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC37.05■■■■□ 3.52
SOX12O15370 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
SOX12O15370 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC37.03■■■■□ 3.52
SOX12O15370 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC37.03■■■■□ 3.52
SOX12O15370 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC37.03■■■■□ 3.52
SOX12O15370 BOD1-206ENST00000480951 814 ntTSL 2 BASIC37.03■■■■□ 3.52
SOX12O15370 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC37.02■■■■□ 3.52
SOX12O15370 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC37.01■■■■□ 3.52
SOX12O15370 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC37.01■■■■□ 3.52
SOX12O15370 MBP-237ENST00000579129 1052 ntTSL 5 BASIC37.01■■■■□ 3.52
SOX12O15370 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC37■■■■□ 3.51
SOX12O15370 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
SOX12O15370 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
SOX12O15370 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
SOX12O15370 HLA-V-202ENST00000446817 847 ntBASIC36.98■■■■□ 3.51
SOX12O15370 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC36.97■■■■□ 3.51
SOX12O15370 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC36.96■■■■□ 3.51
SOX12O15370 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
SOX12O15370 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
SOX12O15370 ZNRF2P2-203ENST00000454624 420 ntBASIC36.96■■■■□ 3.51
SOX12O15370 RPS2-209ENST00000529806 993 ntTSL 3 BASIC36.94■■■■□ 3.5
SOX12O15370 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
SOX12O15370 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
SOX12O15370 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
SOX12O15370 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
SOX12O15370 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC36.92■■■■□ 3.5
SOX12O15370 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC36.91■■■■□ 3.5
SOX12O15370 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC36.9■■■■□ 3.5
SOX12O15370 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
SOX12O15370 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
SOX12O15370 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
SOX12O15370 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
SOX12O15370 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC36.9■■■■□ 3.5
SOX12O15370 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
SOX12O15370 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
SOX12O15370 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
SOX12O15370 HGH1-207ENST00000628266 258 ntTSL 5 BASIC36.87■■■■□ 3.49
SOX12O15370 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
SOX12O15370 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
SOX12O15370 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
SOX12O15370 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
SOX12O15370 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC36.85■■■■□ 3.49
SOX12O15370 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
SOX12O15370 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
SOX12O15370 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
SOX12O15370 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
SOX12O15370 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC36.82■■■■□ 3.49
SOX12O15370 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
SOX12O15370 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC36.81■■■■□ 3.48
SOX12O15370 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC36.8■■■■□ 3.48
SOX12O15370 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
SOX12O15370 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC36.8■■■■□ 3.48
SOX12O15370 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC36.79■■■■□ 3.48
SOX12O15370 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC36.77■■■■□ 3.48
SOX12O15370 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC36.76■■■■□ 3.48
SOX12O15370 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC36.76■■■■□ 3.47
SOX12O15370 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
SOX12O15370 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
SOX12O15370 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC36.73■■■■□ 3.47
SOX12O15370 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC36.72■■■■□ 3.47
SOX12O15370 DUX4L29-201ENST00000425409 679 ntBASIC36.71■■■■□ 3.47
SOX12O15370 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC36.71■■■■□ 3.47
SOX12O15370 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC36.7■■■■□ 3.47
SOX12O15370 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC36.69■■■■□ 3.46
SOX12O15370 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
SOX12O15370 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC36.68■■■■□ 3.46
SOX12O15370 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC36.66■■■■□ 3.46
SOX12O15370 AC021231.2-201ENST00000594613 730 ntBASIC36.65■■■■□ 3.46
SOX12O15370 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC36.65■■■■□ 3.46
SOX12O15370 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC36.64■■■■□ 3.46
SOX12O15370 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
SOX12O15370 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
SOX12O15370 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC36.62■■■■□ 3.45
SOX12O15370 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
SOX12O15370 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC36.61■■■■□ 3.45
SOX12O15370 RPS2-202ENST00000526522 924 ntTSL 2 BASIC36.6■■■■□ 3.45
SOX12O15370 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC36.59■■■■□ 3.45
SOX12O15370 CIB2-204ENST00000557846 934 ntTSL 3 BASIC36.59■■■■□ 3.45
SOX12O15370 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC36.59■■■■□ 3.45
SOX12O15370 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
SOX12O15370 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC36.58■■■■□ 3.45
SOX12O15370 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC36.58■■■■□ 3.45
SOX12O15370 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC36.57■■■■□ 3.44
SOX12O15370 MIR6090-201ENST00000622481 60 ntBASIC36.57■■■■□ 3.44
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms