Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PDLIM1O00151 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
PDLIM1O00151 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDLIM1O00151 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.66■■□□□ 1.7
PDLIM1O00151 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDLIM1O00151 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC25.65■■□□□ 1.7
PDLIM1O00151 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDLIM1O00151 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.65■■□□□ 1.7
PDLIM1O00151 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PDLIM1O00151 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDLIM1O00151 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PDLIM1O00151 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.62■■□□□ 1.69
PDLIM1O00151 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDLIM1O00151 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PDLIM1O00151 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
PDLIM1O00151 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.6■■□□□ 1.69
PDLIM1O00151 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC25.59■■□□□ 1.69
PDLIM1O00151 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
PDLIM1O00151 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.58■■□□□ 1.69
PDLIM1O00151 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
PDLIM1O00151 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.56■■□□□ 1.68
PDLIM1O00151 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.56■■□□□ 1.68
PDLIM1O00151 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.55■■□□□ 1.68
PDLIM1O00151 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDLIM1O00151 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC25.55■■□□□ 1.68
PDLIM1O00151 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.55■■□□□ 1.68
PDLIM1O00151 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PDLIM1O00151 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDLIM1O00151 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDLIM1O00151 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.52■■□□□ 1.68
PDLIM1O00151 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
PDLIM1O00151 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
PDLIM1O00151 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
PDLIM1O00151 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDLIM1O00151 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDLIM1O00151 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDLIM1O00151 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
PDLIM1O00151 AP002365.1-201ENST00000603448 772 ntBASIC25.49■■□□□ 1.67
PDLIM1O00151 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDLIM1O00151 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDLIM1O00151 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDLIM1O00151 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PDLIM1O00151 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDLIM1O00151 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.44■■□□□ 1.66
PDLIM1O00151 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PDLIM1O00151 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
PDLIM1O00151 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
PDLIM1O00151 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PDLIM1O00151 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
PDLIM1O00151 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
PDLIM1O00151 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
PDLIM1O00151 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PDLIM1O00151 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
PDLIM1O00151 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PDLIM1O00151 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
PDLIM1O00151 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
PDLIM1O00151 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDLIM1O00151 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDLIM1O00151 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.36■■□□□ 1.65
PDLIM1O00151 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PDLIM1O00151 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.35■■□□□ 1.65
PDLIM1O00151 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDLIM1O00151 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDLIM1O00151 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
PDLIM1O00151 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.35■■□□□ 1.65
PDLIM1O00151 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.34■■□□□ 1.65
PDLIM1O00151 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PDLIM1O00151 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PDLIM1O00151 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PDLIM1O00151 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PDLIM1O00151 DYNLL1-208ENST00000550178 581 ntBASIC25.33■■□□□ 1.65
PDLIM1O00151 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PDLIM1O00151 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PDLIM1O00151 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.32■■□□□ 1.64
PDLIM1O00151 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.32■■□□□ 1.64
PDLIM1O00151 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PDLIM1O00151 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDLIM1O00151 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDLIM1O00151 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDLIM1O00151 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
PDLIM1O00151 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDLIM1O00151 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDLIM1O00151 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDLIM1O00151 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PDLIM1O00151 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
PDLIM1O00151 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.28■■□□□ 1.64
PDLIM1O00151 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PDLIM1O00151 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
PDLIM1O00151 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PDLIM1O00151 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDLIM1O00151 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.25■■□□□ 1.63
PDLIM1O00151 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PDLIM1O00151 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PDLIM1O00151 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.25■■□□□ 1.63
PDLIM1O00151 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC25.24■■□□□ 1.63
PDLIM1O00151 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PDLIM1O00151 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PDLIM1O00151 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PDLIM1O00151 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.21■■□□□ 1.63
PDLIM1O00151 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms