Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
PDLIM1O00151 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
PDLIM1O00151 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.27■■■□□ 2.6
PDLIM1O00151 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PDLIM1O00151 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PDLIM1O00151 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDLIM1O00151 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.41■■■□□ 2.46
PDLIM1O00151 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.32■■■□□ 2.44
PDLIM1O00151 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDLIM1O00151 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
PDLIM1O00151 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
PDLIM1O00151 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.16■■■□□ 2.42
PDLIM1O00151 AL356512.1-201ENST00000607453 1739 ntBASIC30.1■■■□□ 2.41
PDLIM1O00151 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.01■■■□□ 2.39
PDLIM1O00151 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
PDLIM1O00151 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
PDLIM1O00151 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.77■■■□□ 2.36
PDLIM1O00151 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
PDLIM1O00151 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.73■■■□□ 2.35
PDLIM1O00151 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
PDLIM1O00151 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
PDLIM1O00151 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PDLIM1O00151 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
PDLIM1O00151 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PDLIM1O00151 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PDLIM1O00151 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PDLIM1O00151 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.14■■■□□ 2.25
PDLIM1O00151 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.13■■■□□ 2.25
PDLIM1O00151 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
PDLIM1O00151 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
PDLIM1O00151 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
PDLIM1O00151 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
PDLIM1O00151 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PDLIM1O00151 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PDLIM1O00151 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.82■■■□□ 2.2
PDLIM1O00151 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PDLIM1O00151 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
PDLIM1O00151 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
PDLIM1O00151 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PDLIM1O00151 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC28.57■■■□□ 2.16
PDLIM1O00151 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PDLIM1O00151 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PDLIM1O00151 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
PDLIM1O00151 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PDLIM1O00151 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PDLIM1O00151 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PDLIM1O00151 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
PDLIM1O00151 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.4■■■□□ 2.14
PDLIM1O00151 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PDLIM1O00151 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PDLIM1O00151 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
PDLIM1O00151 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PDLIM1O00151 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
PDLIM1O00151 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
PDLIM1O00151 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
PDLIM1O00151 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.18■■■□□ 2.1
PDLIM1O00151 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
PDLIM1O00151 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
PDLIM1O00151 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC28.05■■■□□ 2.08
PDLIM1O00151 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PDLIM1O00151 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.01■■■□□ 2.07
PDLIM1O00151 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.01■■■□□ 2.07
PDLIM1O00151 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28■■■□□ 2.07
PDLIM1O00151 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28■■■□□ 2.07
PDLIM1O00151 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
PDLIM1O00151 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.97■■■□□ 2.07
PDLIM1O00151 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
PDLIM1O00151 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PDLIM1O00151 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC27.89■■■□□ 2.06
PDLIM1O00151 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
PDLIM1O00151 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.87■■■□□ 2.05
PDLIM1O00151 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDLIM1O00151 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PDLIM1O00151 AL161658.1-201ENST00000623641 1967 ntBASIC27.79■■■□□ 2.04
PDLIM1O00151 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.78■■■□□ 2.04
PDLIM1O00151 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
PDLIM1O00151 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PDLIM1O00151 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC27.73■■■□□ 2.03
PDLIM1O00151 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
PDLIM1O00151 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PDLIM1O00151 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PDLIM1O00151 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PDLIM1O00151 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.62■■■□□ 2.01
PDLIM1O00151 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.6■■■□□ 2.01
PDLIM1O00151 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.58■■■□□ 2.01
PDLIM1O00151 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PDLIM1O00151 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PDLIM1O00151 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
PDLIM1O00151 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PDLIM1O00151 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.54■■■□□ 2
PDLIM1O00151 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.52■■■□□ 2
PDLIM1O00151 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
PDLIM1O00151 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.49■■□□□ 1.99
PDLIM1O00151 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
PDLIM1O00151 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PDLIM1O00151 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.43■■□□□ 1.98
PDLIM1O00151 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
PDLIM1O00151 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PDLIM1O00151 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PDLIM1O00151 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms