Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
PDLIM1O00151 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
PDLIM1O00151 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.27■■■□□ 2.6
PDLIM1O00151 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PDLIM1O00151 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PDLIM1O00151 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PDLIM1O00151 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.41■■■□□ 2.46
PDLIM1O00151 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.32■■■□□ 2.44
PDLIM1O00151 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDLIM1O00151 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
PDLIM1O00151 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
PDLIM1O00151 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.16■■■□□ 2.42
PDLIM1O00151 AL356512.1-201ENST00000607453 1739 ntBASIC30.1■■■□□ 2.41
PDLIM1O00151 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.01■■■□□ 2.39
PDLIM1O00151 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
PDLIM1O00151 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
PDLIM1O00151 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.77■■■□□ 2.36
PDLIM1O00151 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
PDLIM1O00151 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.73■■■□□ 2.35
PDLIM1O00151 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
PDLIM1O00151 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
PDLIM1O00151 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PDLIM1O00151 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
PDLIM1O00151 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PDLIM1O00151 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PDLIM1O00151 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PDLIM1O00151 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.14■■■□□ 2.25
PDLIM1O00151 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.13■■■□□ 2.25
PDLIM1O00151 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
PDLIM1O00151 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
PDLIM1O00151 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
PDLIM1O00151 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
PDLIM1O00151 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PDLIM1O00151 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PDLIM1O00151 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.82■■■□□ 2.2
PDLIM1O00151 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PDLIM1O00151 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
PDLIM1O00151 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
PDLIM1O00151 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PDLIM1O00151 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC28.57■■■□□ 2.16
PDLIM1O00151 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PDLIM1O00151 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
PDLIM1O00151 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
PDLIM1O00151 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PDLIM1O00151 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PDLIM1O00151 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PDLIM1O00151 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
PDLIM1O00151 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.4■■■□□ 2.14
PDLIM1O00151 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PDLIM1O00151 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PDLIM1O00151 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
PDLIM1O00151 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PDLIM1O00151 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
PDLIM1O00151 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
PDLIM1O00151 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
PDLIM1O00151 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.18■■■□□ 2.1
PDLIM1O00151 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
PDLIM1O00151 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
PDLIM1O00151 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC28.05■■■□□ 2.08
PDLIM1O00151 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PDLIM1O00151 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.01■■■□□ 2.07
PDLIM1O00151 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.01■■■□□ 2.07
PDLIM1O00151 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28■■■□□ 2.07
PDLIM1O00151 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28■■■□□ 2.07
PDLIM1O00151 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
PDLIM1O00151 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.97■■■□□ 2.07
PDLIM1O00151 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
PDLIM1O00151 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PDLIM1O00151 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC27.89■■■□□ 2.06
PDLIM1O00151 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
PDLIM1O00151 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.87■■■□□ 2.05
PDLIM1O00151 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDLIM1O00151 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PDLIM1O00151 AL161658.1-201ENST00000623641 1967 ntBASIC27.79■■■□□ 2.04
PDLIM1O00151 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.78■■■□□ 2.04
PDLIM1O00151 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
PDLIM1O00151 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PDLIM1O00151 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC27.73■■■□□ 2.03
PDLIM1O00151 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
PDLIM1O00151 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PDLIM1O00151 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PDLIM1O00151 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PDLIM1O00151 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.62■■■□□ 2.01
PDLIM1O00151 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.6■■■□□ 2.01
PDLIM1O00151 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.58■■■□□ 2.01
PDLIM1O00151 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PDLIM1O00151 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PDLIM1O00151 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
PDLIM1O00151 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PDLIM1O00151 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.54■■■□□ 2
PDLIM1O00151 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.52■■■□□ 2
PDLIM1O00151 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
PDLIM1O00151 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.49■■□□□ 1.99
PDLIM1O00151 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
PDLIM1O00151 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PDLIM1O00151 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.43■■□□□ 1.98
PDLIM1O00151 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
PDLIM1O00151 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PDLIM1O00151 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PDLIM1O00151 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms