Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC24.03■■□□□ 1.44
TRDV1A0A1B0GX56 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRDV1A0A1B0GX56 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRDV1A0A1B0GX56 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC24.02■■□□□ 1.44
TRDV1A0A1B0GX56 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.43
TRDV1A0A1B0GX56 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRDV1A0A1B0GX56 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
TRDV1A0A1B0GX56 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRDV1A0A1B0GX56 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRDV1A0A1B0GX56 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRDV1A0A1B0GX56 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRDV1A0A1B0GX56 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
TRDV1A0A1B0GX56 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRDV1A0A1B0GX56 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRDV1A0A1B0GX56 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRDV1A0A1B0GX56 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRDV1A0A1B0GX56 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRDV1A0A1B0GX56 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.95■■□□□ 1.42
TRDV1A0A1B0GX56 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.94■■□□□ 1.42
TRDV1A0A1B0GX56 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRDV1A0A1B0GX56 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRDV1A0A1B0GX56 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TRDV1A0A1B0GX56 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
TRDV1A0A1B0GX56 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRDV1A0A1B0GX56 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRDV1A0A1B0GX56 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRDV1A0A1B0GX56 ST7-AS1-201ENST00000456775 1889 ntBASIC23.89■■□□□ 1.41
TRDV1A0A1B0GX56 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRDV1A0A1B0GX56 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRDV1A0A1B0GX56 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.87■■□□□ 1.41
TRDV1A0A1B0GX56 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRDV1A0A1B0GX56 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRDV1A0A1B0GX56 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC23.84■■□□□ 1.41
TRDV1A0A1B0GX56 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRDV1A0A1B0GX56 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.83■■□□□ 1.4
TRDV1A0A1B0GX56 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.4
TRDV1A0A1B0GX56 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRDV1A0A1B0GX56 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.82■■□□□ 1.4
TRDV1A0A1B0GX56 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.82■■□□□ 1.4
TRDV1A0A1B0GX56 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.81■■□□□ 1.4
TRDV1A0A1B0GX56 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRDV1A0A1B0GX56 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
TRDV1A0A1B0GX56 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRDV1A0A1B0GX56 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRDV1A0A1B0GX56 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRDV1A0A1B0GX56 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRDV1A0A1B0GX56 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.76■■□□□ 1.39
TRDV1A0A1B0GX56 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRDV1A0A1B0GX56 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRDV1A0A1B0GX56 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.74■■□□□ 1.39
TRDV1A0A1B0GX56 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC23.74■■□□□ 1.39
TRDV1A0A1B0GX56 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TRDV1A0A1B0GX56 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRDV1A0A1B0GX56 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRDV1A0A1B0GX56 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRDV1A0A1B0GX56 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TRDV1A0A1B0GX56 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
TRDV1A0A1B0GX56 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
TRDV1A0A1B0GX56 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRDV1A0A1B0GX56 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRDV1A0A1B0GX56 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRDV1A0A1B0GX56 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRDV1A0A1B0GX56 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.72■■□□□ 1.39
TRDV1A0A1B0GX56 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
TRDV1A0A1B0GX56 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRDV1A0A1B0GX56 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.7■■□□□ 1.39
TRDV1A0A1B0GX56 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRDV1A0A1B0GX56 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRDV1A0A1B0GX56 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRDV1A0A1B0GX56 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC23.69■■□□□ 1.38
TRDV1A0A1B0GX56 AC142086.6-201ENST00000621154 1765 ntBASIC23.69■■□□□ 1.38
TRDV1A0A1B0GX56 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRDV1A0A1B0GX56 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
TRDV1A0A1B0GX56 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRDV1A0A1B0GX56 MVK-208ENST00000539696 608 ntTSL 5 BASIC23.68■■□□□ 1.38
TRDV1A0A1B0GX56 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRDV1A0A1B0GX56 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.67■■□□□ 1.38
TRDV1A0A1B0GX56 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRDV1A0A1B0GX56 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRDV1A0A1B0GX56 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.66■■□□□ 1.38
TRDV1A0A1B0GX56 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRDV1A0A1B0GX56 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRDV1A0A1B0GX56 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRDV1A0A1B0GX56 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRDV1A0A1B0GX56 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRDV1A0A1B0GX56 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
TRDV1A0A1B0GX56 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TRDV1A0A1B0GX56 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.64■■□□□ 1.37
TRDV1A0A1B0GX56 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRDV1A0A1B0GX56 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRDV1A0A1B0GX56 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRDV1A0A1B0GX56 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRDV1A0A1B0GX56 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRDV1A0A1B0GX56 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRDV1A0A1B0GX56 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRDV1A0A1B0GX56 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
TRDV1A0A1B0GX56 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
TRDV1A0A1B0GX56 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRDV1A0A1B0GX56 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRDV1A0A1B0GX56 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms