Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.36■□□□□ 0.69
TRGV4A0A0C4DH28 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRGV4A0A0C4DH28 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRGV4A0A0C4DH28 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRGV4A0A0C4DH28 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.35■□□□□ 0.69
TRGV4A0A0C4DH28 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRGV4A0A0C4DH28 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.33■□□□□ 0.69
TRGV4A0A0C4DH28 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.33■□□□□ 0.69
TRGV4A0A0C4DH28 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.33■□□□□ 0.68
TRGV4A0A0C4DH28 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRGV4A0A0C4DH28 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRGV4A0A0C4DH28 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRGV4A0A0C4DH28 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRGV4A0A0C4DH28 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRGV4A0A0C4DH28 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRGV4A0A0C4DH28 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRGV4A0A0C4DH28 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRGV4A0A0C4DH28 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRGV4A0A0C4DH28 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRGV4A0A0C4DH28 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
TRGV4A0A0C4DH28 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRGV4A0A0C4DH28 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRGV4A0A0C4DH28 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.27■□□□□ 0.68
TRGV4A0A0C4DH28 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRGV4A0A0C4DH28 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRGV4A0A0C4DH28 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRGV4A0A0C4DH28 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.25■□□□□ 0.67
TRGV4A0A0C4DH28 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRGV4A0A0C4DH28 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRGV4A0A0C4DH28 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.24■□□□□ 0.67
TRGV4A0A0C4DH28 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
TRGV4A0A0C4DH28 RARRES2P7-201ENST00000567349 469 ntBASIC19.23■□□□□ 0.67
TRGV4A0A0C4DH28 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.22■□□□□ 0.67
TRGV4A0A0C4DH28 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRGV4A0A0C4DH28 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV4A0A0C4DH28 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV4A0A0C4DH28 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.19■□□□□ 0.66
TRGV4A0A0C4DH28 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV4A0A0C4DH28 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.18■□□□□ 0.66
TRGV4A0A0C4DH28 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV4A0A0C4DH28 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV4A0A0C4DH28 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV4A0A0C4DH28 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV4A0A0C4DH28 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.18■□□□□ 0.66
TRGV4A0A0C4DH28 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRGV4A0A0C4DH28 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRGV4A0A0C4DH28 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.13■□□□□ 0.65
TRGV4A0A0C4DH28 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.12■□□□□ 0.65
TRGV4A0A0C4DH28 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRGV4A0A0C4DH28 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRGV4A0A0C4DH28 AL133380.1-201ENST00000506013 324 ntBASIC19.12■□□□□ 0.65
TRGV4A0A0C4DH28 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRGV4A0A0C4DH28 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRGV4A0A0C4DH28 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRGV4A0A0C4DH28 SETD8P1-201ENST00000623146 1180 ntBASIC19.11■□□□□ 0.65
TRGV4A0A0C4DH28 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRGV4A0A0C4DH28 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TRGV4A0A0C4DH28 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
TRGV4A0A0C4DH28 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRGV4A0A0C4DH28 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRGV4A0A0C4DH28 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRGV4A0A0C4DH28 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRGV4A0A0C4DH28 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRGV4A0A0C4DH28 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRGV4A0A0C4DH28 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRGV4A0A0C4DH28 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRGV4A0A0C4DH28 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRGV4A0A0C4DH28 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
TRGV4A0A0C4DH28 WASH5P-204ENST00000632292 975 ntBASIC19.06■□□□□ 0.64
TRGV4A0A0C4DH28 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRGV4A0A0C4DH28 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRGV4A0A0C4DH28 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.04■□□□□ 0.64
TRGV4A0A0C4DH28 AL161658.1-201ENST00000623641 1967 ntBASIC19.04■□□□□ 0.64
TRGV4A0A0C4DH28 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRGV4A0A0C4DH28 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
TRGV4A0A0C4DH28 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRGV4A0A0C4DH28 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRGV4A0A0C4DH28 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRGV4A0A0C4DH28 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRGV4A0A0C4DH28 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TRGV4A0A0C4DH28 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRGV4A0A0C4DH28 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.02■□□□□ 0.63
TRGV4A0A0C4DH28 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRGV4A0A0C4DH28 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRGV4A0A0C4DH28 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRGV4A0A0C4DH28 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRGV4A0A0C4DH28 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19■□□□□ 0.63
TRGV4A0A0C4DH28 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRGV4A0A0C4DH28 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRGV4A0A0C4DH28 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19■□□□□ 0.63
TRGV4A0A0C4DH28 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRGV4A0A0C4DH28 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRGV4A0A0C4DH28 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRGV4A0A0C4DH28 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRGV4A0A0C4DH28 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRGV4A0A0C4DH28 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRGV4A0A0C4DH28 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRGV4A0A0C4DH28 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.96■□□□□ 0.63
TRGV4A0A0C4DH28 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRGV4A0A0C4DH28 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms