Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV7-1A0A0A6YYK4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.06■□□□□ 0.96
TRBV7-1A0A0A6YYK4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.05■□□□□ 0.96
TRBV7-1A0A0A6YYK4 AL133380.1-201ENST00000506013 324 ntBASIC21.05■□□□□ 0.96
TRBV7-1A0A0A6YYK4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV7-1A0A0A6YYK4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV7-1A0A0A6YYK4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.01■□□□□ 0.95
TRBV7-1A0A0A6YYK4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV7-1A0A0A6YYK4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV7-1A0A0A6YYK4 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV7-1A0A0A6YYK4 SETD8P1-201ENST00000623146 1180 ntBASIC21■□□□□ 0.95
TRBV7-1A0A0A6YYK4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV7-1A0A0A6YYK4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV7-1A0A0A6YYK4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV7-1A0A0A6YYK4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV7-1A0A0A6YYK4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV7-1A0A0A6YYK4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV7-1A0A0A6YYK4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
TRBV7-1A0A0A6YYK4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV7-1A0A0A6YYK4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV7-1A0A0A6YYK4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV7-1A0A0A6YYK4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TRBV7-1A0A0A6YYK4 WASH5P-204ENST00000632292 975 ntBASIC20.97■□□□□ 0.95
TRBV7-1A0A0A6YYK4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV7-1A0A0A6YYK4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV7-1A0A0A6YYK4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
TRBV7-1A0A0A6YYK4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV7-1A0A0A6YYK4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV7-1A0A0A6YYK4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV7-1A0A0A6YYK4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV7-1A0A0A6YYK4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TRBV7-1A0A0A6YYK4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV7-1A0A0A6YYK4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV7-1A0A0A6YYK4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV7-1A0A0A6YYK4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV7-1A0A0A6YYK4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV7-1A0A0A6YYK4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV7-1A0A0A6YYK4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV7-1A0A0A6YYK4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV7-1A0A0A6YYK4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.89■□□□□ 0.94
TRBV7-1A0A0A6YYK4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV7-1A0A0A6YYK4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.88■□□□□ 0.93
TRBV7-1A0A0A6YYK4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV7-1A0A0A6YYK4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV7-1A0A0A6YYK4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.88■□□□□ 0.93
TRBV7-1A0A0A6YYK4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV7-1A0A0A6YYK4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV7-1A0A0A6YYK4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.86■□□□□ 0.93
TRBV7-1A0A0A6YYK4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV7-1A0A0A6YYK4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
TRBV7-1A0A0A6YYK4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV7-1A0A0A6YYK4 AL161658.1-201ENST00000623641 1967 ntBASIC20.85■□□□□ 0.93
TRBV7-1A0A0A6YYK4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV7-1A0A0A6YYK4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRBV7-1A0A0A6YYK4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV7-1A0A0A6YYK4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV7-1A0A0A6YYK4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
TRBV7-1A0A0A6YYK4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV7-1A0A0A6YYK4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.82■□□□□ 0.92
TRBV7-1A0A0A6YYK4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.82■□□□□ 0.92
TRBV7-1A0A0A6YYK4 AC097358.2-201ENST00000607541 1159 ntBASIC20.82■□□□□ 0.92
TRBV7-1A0A0A6YYK4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.81■□□□□ 0.92
TRBV7-1A0A0A6YYK4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV7-1A0A0A6YYK4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV7-1A0A0A6YYK4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TRBV7-1A0A0A6YYK4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV7-1A0A0A6YYK4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV7-1A0A0A6YYK4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
TRBV7-1A0A0A6YYK4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV7-1A0A0A6YYK4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV7-1A0A0A6YYK4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV7-1A0A0A6YYK4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV7-1A0A0A6YYK4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV7-1A0A0A6YYK4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.77■□□□□ 0.92
TRBV7-1A0A0A6YYK4 AC136428.2-201ENST00000563187 214 ntBASIC20.77■□□□□ 0.92
TRBV7-1A0A0A6YYK4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV7-1A0A0A6YYK4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRBV7-1A0A0A6YYK4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV7-1A0A0A6YYK4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRBV7-1A0A0A6YYK4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV7-1A0A0A6YYK4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TRBV7-1A0A0A6YYK4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV7-1A0A0A6YYK4 AL391121.1-201ENST00000607967 1349 ntBASIC20.75■□□□□ 0.91
TRBV7-1A0A0A6YYK4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV7-1A0A0A6YYK4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV7-1A0A0A6YYK4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TRBV7-1A0A0A6YYK4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV7-1A0A0A6YYK4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV7-1A0A0A6YYK4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.73■□□□□ 0.91
TRBV7-1A0A0A6YYK4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.73■□□□□ 0.91
TRBV7-1A0A0A6YYK4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV7-1A0A0A6YYK4 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV7-1A0A0A6YYK4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV7-1A0A0A6YYK4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TRBV7-1A0A0A6YYK4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV7-1A0A0A6YYK4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV7-1A0A0A6YYK4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV7-1A0A0A6YYK4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.7■□□□□ 0.9
TRBV7-1A0A0A6YYK4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV7-1A0A0A6YYK4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms