Protein–RNA interactions for Protein: A0A0A0MS01

TRGV10, T-cell receptor gamma variable 10 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV10A0A0A0MS01 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRGV10A0A0A0MS01 RARRES2P7-201ENST00000567349 469 ntBASIC22.54■■□□□ 1.2
TRGV10A0A0A0MS01 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRGV10A0A0A0MS01 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.51■■□□□ 1.19
TRGV10A0A0A0MS01 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
TRGV10A0A0A0MS01 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRGV10A0A0A0MS01 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.5■■□□□ 1.19
TRGV10A0A0A0MS01 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRGV10A0A0A0MS01 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRGV10A0A0A0MS01 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRGV10A0A0A0MS01 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
TRGV10A0A0A0MS01 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TRGV10A0A0A0MS01 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.45■■□□□ 1.18
TRGV10A0A0A0MS01 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.44■■□□□ 1.18
TRGV10A0A0A0MS01 AL133380.1-201ENST00000506013 324 ntBASIC22.44■■□□□ 1.18
TRGV10A0A0A0MS01 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRGV10A0A0A0MS01 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRGV10A0A0A0MS01 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRGV10A0A0A0MS01 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRGV10A0A0A0MS01 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRGV10A0A0A0MS01 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
TRGV10A0A0A0MS01 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.41■■□□□ 1.18
TRGV10A0A0A0MS01 SETD8P1-201ENST00000623146 1180 ntBASIC22.41■■□□□ 1.18
TRGV10A0A0A0MS01 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRGV10A0A0A0MS01 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRGV10A0A0A0MS01 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.4■■□□□ 1.18
TRGV10A0A0A0MS01 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRGV10A0A0A0MS01 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TRGV10A0A0A0MS01 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
TRGV10A0A0A0MS01 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRGV10A0A0A0MS01 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRGV10A0A0A0MS01 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRGV10A0A0A0MS01 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRGV10A0A0A0MS01 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.36■■□□□ 1.17
TRGV10A0A0A0MS01 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRGV10A0A0A0MS01 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
TRGV10A0A0A0MS01 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRGV10A0A0A0MS01 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRGV10A0A0A0MS01 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRGV10A0A0A0MS01 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRGV10A0A0A0MS01 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TRGV10A0A0A0MS01 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRGV10A0A0A0MS01 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
TRGV10A0A0A0MS01 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
TRGV10A0A0A0MS01 WASH5P-204ENST00000632292 975 ntBASIC22.33■■□□□ 1.17
TRGV10A0A0A0MS01 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
TRGV10A0A0A0MS01 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRGV10A0A0A0MS01 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC22.32■■□□□ 1.16
TRGV10A0A0A0MS01 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TRGV10A0A0A0MS01 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRGV10A0A0A0MS01 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRGV10A0A0A0MS01 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRGV10A0A0A0MS01 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRGV10A0A0A0MS01 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRGV10A0A0A0MS01 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRGV10A0A0A0MS01 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.27■■□□□ 1.16
TRGV10A0A0A0MS01 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
TRGV10A0A0A0MS01 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRGV10A0A0A0MS01 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
TRGV10A0A0A0MS01 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRGV10A0A0A0MS01 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.26■■□□□ 1.15
TRGV10A0A0A0MS01 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.25■■□□□ 1.15
TRGV10A0A0A0MS01 AL161658.1-201ENST00000623641 1967 ntBASIC22.24■■□□□ 1.15
TRGV10A0A0A0MS01 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRGV10A0A0A0MS01 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRGV10A0A0A0MS01 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRGV10A0A0A0MS01 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
TRGV10A0A0A0MS01 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRGV10A0A0A0MS01 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRGV10A0A0A0MS01 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.22■■□□□ 1.15
TRGV10A0A0A0MS01 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22.22■■□□□ 1.15
TRGV10A0A0A0MS01 AC097358.2-201ENST00000607541 1159 ntBASIC22.22■■□□□ 1.15
TRGV10A0A0A0MS01 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
TRGV10A0A0A0MS01 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRGV10A0A0A0MS01 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRGV10A0A0A0MS01 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRGV10A0A0A0MS01 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
TRGV10A0A0A0MS01 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
TRGV10A0A0A0MS01 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRGV10A0A0A0MS01 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRGV10A0A0A0MS01 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.18■■□□□ 1.14
TRGV10A0A0A0MS01 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRGV10A0A0A0MS01 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TRGV10A0A0A0MS01 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.17■■□□□ 1.14
TRGV10A0A0A0MS01 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRGV10A0A0A0MS01 AC136428.2-201ENST00000563187 214 ntBASIC22.16■■□□□ 1.14
TRGV10A0A0A0MS01 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRGV10A0A0A0MS01 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRGV10A0A0A0MS01 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
TRGV10A0A0A0MS01 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
TRGV10A0A0A0MS01 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TRGV10A0A0A0MS01 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TRGV10A0A0A0MS01 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRGV10A0A0A0MS01 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRGV10A0A0A0MS01 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.14■■□□□ 1.13
TRGV10A0A0A0MS01 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRGV10A0A0A0MS01 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRGV10A0A0A0MS01 AL391121.1-201ENST00000607967 1349 ntBASIC22.12■■□□□ 1.13
TRGV10A0A0A0MS01 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.12■■□□□ 1.13
TRGV10A0A0A0MS01 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms