Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COX11Q9Y6N1 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
COX11Q9Y6N1 ABCB10P3-201ENST00000561950 2166 ntBASIC20.09■□□□□ 0.81
COX11Q9Y6N1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COX11Q9Y6N1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COX11Q9Y6N1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COX11Q9Y6N1 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
COX11Q9Y6N1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
COX11Q9Y6N1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COX11Q9Y6N1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COX11Q9Y6N1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.04■□□□□ 0.8
COX11Q9Y6N1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COX11Q9Y6N1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
COX11Q9Y6N1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
COX11Q9Y6N1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COX11Q9Y6N1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
COX11Q9Y6N1 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COX11Q9Y6N1 AC015813.7-201ENST00000623294 581 ntBASIC20.01■□□□□ 0.79
COX11Q9Y6N1 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
COX11Q9Y6N1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COX11Q9Y6N1 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.98■□□□□ 0.79
COX11Q9Y6N1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COX11Q9Y6N1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COX11Q9Y6N1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
COX11Q9Y6N1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COX11Q9Y6N1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COX11Q9Y6N1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COX11Q9Y6N1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.95■□□□□ 0.78
COX11Q9Y6N1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COX11Q9Y6N1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.94■□□□□ 0.78
COX11Q9Y6N1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COX11Q9Y6N1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COX11Q9Y6N1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COX11Q9Y6N1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.93■□□□□ 0.78
COX11Q9Y6N1 ABCB10P1-201ENST00000614297 2181 ntBASIC19.93■□□□□ 0.78
COX11Q9Y6N1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COX11Q9Y6N1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
COX11Q9Y6N1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COX11Q9Y6N1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
COX11Q9Y6N1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COX11Q9Y6N1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COX11Q9Y6N1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
COX11Q9Y6N1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COX11Q9Y6N1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COX11Q9Y6N1 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COX11Q9Y6N1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COX11Q9Y6N1 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.84■□□□□ 0.77
COX11Q9Y6N1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COX11Q9Y6N1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COX11Q9Y6N1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COX11Q9Y6N1 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC19.82■□□□□ 0.76
COX11Q9Y6N1 AC006077.2-201ENST00000623591 457 ntBASIC19.82■□□□□ 0.76
COX11Q9Y6N1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COX11Q9Y6N1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COX11Q9Y6N1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COX11Q9Y6N1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COX11Q9Y6N1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.79■□□□□ 0.76
COX11Q9Y6N1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COX11Q9Y6N1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COX11Q9Y6N1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COX11Q9Y6N1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
COX11Q9Y6N1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COX11Q9Y6N1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.77■□□□□ 0.76
COX11Q9Y6N1 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COX11Q9Y6N1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COX11Q9Y6N1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
COX11Q9Y6N1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COX11Q9Y6N1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COX11Q9Y6N1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COX11Q9Y6N1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
COX11Q9Y6N1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COX11Q9Y6N1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COX11Q9Y6N1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COX11Q9Y6N1 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COX11Q9Y6N1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
COX11Q9Y6N1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
COX11Q9Y6N1 ZNRF2P1-201ENST00000441407 443 ntBASIC19.69■□□□□ 0.74
COX11Q9Y6N1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COX11Q9Y6N1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
COX11Q9Y6N1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COX11Q9Y6N1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COX11Q9Y6N1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COX11Q9Y6N1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COX11Q9Y6N1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COX11Q9Y6N1 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COX11Q9Y6N1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COX11Q9Y6N1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COX11Q9Y6N1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COX11Q9Y6N1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COX11Q9Y6N1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COX11Q9Y6N1 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COX11Q9Y6N1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COX11Q9Y6N1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COX11Q9Y6N1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COX11Q9Y6N1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COX11Q9Y6N1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COX11Q9Y6N1 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COX11Q9Y6N1 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COX11Q9Y6N1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.59■□□□□ 0.73
COX11Q9Y6N1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms