Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.61■■□□□ 1.69
HRH3Q9Y5N1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
HRH3Q9Y5N1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.58■■□□□ 1.69
HRH3Q9Y5N1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
HRH3Q9Y5N1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.57■■□□□ 1.68
HRH3Q9Y5N1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.57■■□□□ 1.68
HRH3Q9Y5N1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.57■■□□□ 1.68
HRH3Q9Y5N1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.56■■□□□ 1.68
HRH3Q9Y5N1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.56■■□□□ 1.68
HRH3Q9Y5N1 AC097358.2-201ENST00000607541 1159 ntBASIC25.55■■□□□ 1.68
HRH3Q9Y5N1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
HRH3Q9Y5N1 AC136428.2-201ENST00000563187 214 ntBASIC25.52■■□□□ 1.68
HRH3Q9Y5N1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.52■■□□□ 1.68
HRH3Q9Y5N1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HRH3Q9Y5N1 SETD8P1-201ENST00000623146 1180 ntBASIC25.51■■□□□ 1.67
HRH3Q9Y5N1 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
HRH3Q9Y5N1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.48■■□□□ 1.67
HRH3Q9Y5N1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
HRH3Q9Y5N1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.47■■□□□ 1.67
HRH3Q9Y5N1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.45■■□□□ 1.66
HRH3Q9Y5N1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
HRH3Q9Y5N1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.43■■□□□ 1.66
HRH3Q9Y5N1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
HRH3Q9Y5N1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
HRH3Q9Y5N1 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
HRH3Q9Y5N1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
HRH3Q9Y5N1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.41■■□□□ 1.66
HRH3Q9Y5N1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
HRH3Q9Y5N1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.39■■□□□ 1.66
HRH3Q9Y5N1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.39■■□□□ 1.66
HRH3Q9Y5N1 SUZ12P1-203ENST00000578195 985 ntBASIC25.38■■□□□ 1.65
HRH3Q9Y5N1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HRH3Q9Y5N1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
HRH3Q9Y5N1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
HRH3Q9Y5N1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
HRH3Q9Y5N1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.35■■□□□ 1.65
HRH3Q9Y5N1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.34■■□□□ 1.65
HRH3Q9Y5N1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.34■■□□□ 1.65
HRH3Q9Y5N1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
HRH3Q9Y5N1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
HRH3Q9Y5N1 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
HRH3Q9Y5N1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.31■■□□□ 1.64
HRH3Q9Y5N1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HRH3Q9Y5N1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.29■■□□□ 1.64
HRH3Q9Y5N1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
HRH3Q9Y5N1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HRH3Q9Y5N1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HRH3Q9Y5N1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HRH3Q9Y5N1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HRH3Q9Y5N1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
HRH3Q9Y5N1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HRH3Q9Y5N1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HRH3Q9Y5N1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.25■■□□□ 1.63
HRH3Q9Y5N1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HRH3Q9Y5N1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
HRH3Q9Y5N1 CAHM-201ENST00000604200 896 ntBASIC25.21■■□□□ 1.63
HRH3Q9Y5N1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
HRH3Q9Y5N1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
HRH3Q9Y5N1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.2■■□□□ 1.62
HRH3Q9Y5N1 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HRH3Q9Y5N1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HRH3Q9Y5N1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
HRH3Q9Y5N1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.18■■□□□ 1.62
HRH3Q9Y5N1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HRH3Q9Y5N1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HRH3Q9Y5N1 AL133380.1-201ENST00000506013 324 ntBASIC25.17■■□□□ 1.62
HRH3Q9Y5N1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.17■■□□□ 1.62
HRH3Q9Y5N1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HRH3Q9Y5N1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.16■■□□□ 1.62
HRH3Q9Y5N1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.15■■□□□ 1.62
HRH3Q9Y5N1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
HRH3Q9Y5N1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
HRH3Q9Y5N1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
HRH3Q9Y5N1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
HRH3Q9Y5N1 RPS2P35-201ENST00000443417 897 ntBASIC25.14■■□□□ 1.62
HRH3Q9Y5N1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HRH3Q9Y5N1 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HRH3Q9Y5N1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.12■■□□□ 1.61
HRH3Q9Y5N1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
HRH3Q9Y5N1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HRH3Q9Y5N1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.1■■□□□ 1.61
HRH3Q9Y5N1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
HRH3Q9Y5N1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
HRH3Q9Y5N1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HRH3Q9Y5N1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HRH3Q9Y5N1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
HRH3Q9Y5N1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.07■■□□□ 1.6
HRH3Q9Y5N1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
HRH3Q9Y5N1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HRH3Q9Y5N1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
HRH3Q9Y5N1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HRH3Q9Y5N1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
HRH3Q9Y5N1 AL391121.1-201ENST00000607967 1349 ntBASIC25.03■■□□□ 1.6
HRH3Q9Y5N1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
HRH3Q9Y5N1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
HRH3Q9Y5N1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
HRH3Q9Y5N1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
HRH3Q9Y5N1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HRH3Q9Y5N1 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
HRH3Q9Y5N1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms