Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHGC4Q9Y5F7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PCDHGC4Q9Y5F7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.15■■■□□ 2.1
PCDHGC4Q9Y5F7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
PCDHGC4Q9Y5F7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PCDHGC4Q9Y5F7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
PCDHGC4Q9Y5F7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
PCDHGC4Q9Y5F7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.12■■■□□ 2.09
PCDHGC4Q9Y5F7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDHGC4Q9Y5F7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.07■■■□□ 2.08
PCDHGC4Q9Y5F7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDHGC4Q9Y5F7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.07■■■□□ 2.08
PCDHGC4Q9Y5F7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHGC4Q9Y5F7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDHGC4Q9Y5F7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.06■■■□□ 2.08
PCDHGC4Q9Y5F7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.03■■■□□ 2.08
PCDHGC4Q9Y5F7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHGC4Q9Y5F7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHGC4Q9Y5F7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHGC4Q9Y5F7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.02■■■□□ 2.08
PCDHGC4Q9Y5F7 RARRES2P7-201ENST00000567349 469 ntBASIC28.02■■■□□ 2.08
PCDHGC4Q9Y5F7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC28.02■■■□□ 2.08
PCDHGC4Q9Y5F7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
PCDHGC4Q9Y5F7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28■■■□□ 2.07
PCDHGC4Q9Y5F7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28■■■□□ 2.07
PCDHGC4Q9Y5F7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PCDHGC4Q9Y5F7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
PCDHGC4Q9Y5F7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
PCDHGC4Q9Y5F7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.96■■■□□ 2.07
PCDHGC4Q9Y5F7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PCDHGC4Q9Y5F7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.94■■■□□ 2.06
PCDHGC4Q9Y5F7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
PCDHGC4Q9Y5F7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
PCDHGC4Q9Y5F7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.92■■■□□ 2.06
PCDHGC4Q9Y5F7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
PCDHGC4Q9Y5F7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PCDHGC4Q9Y5F7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
PCDHGC4Q9Y5F7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PCDHGC4Q9Y5F7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.87■■■□□ 2.05
PCDHGC4Q9Y5F7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
PCDHGC4Q9Y5F7 SETD8P1-201ENST00000623146 1180 ntBASIC27.87■■■□□ 2.05
PCDHGC4Q9Y5F7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHGC4Q9Y5F7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PCDHGC4Q9Y5F7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
PCDHGC4Q9Y5F7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PCDHGC4Q9Y5F7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCDHGC4Q9Y5F7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PCDHGC4Q9Y5F7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PCDHGC4Q9Y5F7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.8■■■□□ 2.04
PCDHGC4Q9Y5F7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PCDHGC4Q9Y5F7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.79■■■□□ 2.04
PCDHGC4Q9Y5F7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.78■■■□□ 2.04
PCDHGC4Q9Y5F7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
PCDHGC4Q9Y5F7 AL133380.1-201ENST00000506013 324 ntBASIC27.76■■■□□ 2.03
PCDHGC4Q9Y5F7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
PCDHGC4Q9Y5F7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHGC4Q9Y5F7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.74■■■□□ 2.03
PCDHGC4Q9Y5F7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
PCDHGC4Q9Y5F7 AC097358.2-201ENST00000607541 1159 ntBASIC27.73■■■□□ 2.03
PCDHGC4Q9Y5F7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PCDHGC4Q9Y5F7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PCDHGC4Q9Y5F7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.71■■■□□ 2.03
PCDHGC4Q9Y5F7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
PCDHGC4Q9Y5F7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
PCDHGC4Q9Y5F7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
PCDHGC4Q9Y5F7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
PCDHGC4Q9Y5F7 AC136428.2-201ENST00000563187 214 ntBASIC27.7■■■□□ 2.02
PCDHGC4Q9Y5F7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PCDHGC4Q9Y5F7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.68■■■□□ 2.02
PCDHGC4Q9Y5F7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.68■■■□□ 2.02
PCDHGC4Q9Y5F7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.66■■■□□ 2.02
PCDHGC4Q9Y5F7 AC120057.4-201ENST00000624722 1615 ntBASIC27.64■■■□□ 2.02
PCDHGC4Q9Y5F7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PCDHGC4Q9Y5F7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
PCDHGC4Q9Y5F7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.64■■■□□ 2.02
PCDHGC4Q9Y5F7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
PCDHGC4Q9Y5F7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.63■■■□□ 2.01
PCDHGC4Q9Y5F7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.63■■■□□ 2.01
PCDHGC4Q9Y5F7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.63■■■□□ 2.01
PCDHGC4Q9Y5F7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.61■■■□□ 2.01
PCDHGC4Q9Y5F7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDHGC4Q9Y5F7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDHGC4Q9Y5F7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PCDHGC4Q9Y5F7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.59■■■□□ 2.01
PCDHGC4Q9Y5F7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PCDHGC4Q9Y5F7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC27.58■■■□□ 2.01
PCDHGC4Q9Y5F7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PCDHGC4Q9Y5F7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
PCDHGC4Q9Y5F7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PCDHGC4Q9Y5F7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PCDHGC4Q9Y5F7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.56■■■□□ 2
PCDHGC4Q9Y5F7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PCDHGC4Q9Y5F7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PCDHGC4Q9Y5F7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PCDHGC4Q9Y5F7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.54■■■□□ 2
PCDHGC4Q9Y5F7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.53■■■□□ 2
PCDHGC4Q9Y5F7 CAHM-201ENST00000604200 896 ntBASIC27.53■■■□□ 2
PCDHGC4Q9Y5F7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PCDHGC4Q9Y5F7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PCDHGC4Q9Y5F7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms