Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.44■■■□□ 2.46
NDST4Q9H3R1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
NDST4Q9H3R1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
NDST4Q9H3R1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.41■■■□□ 2.46
NDST4Q9H3R1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
NDST4Q9H3R1 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.39■■■□□ 2.46
NDST4Q9H3R1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
NDST4Q9H3R1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
NDST4Q9H3R1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
NDST4Q9H3R1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
NDST4Q9H3R1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
NDST4Q9H3R1 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
NDST4Q9H3R1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.36■■■□□ 2.45
NDST4Q9H3R1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.36■■■□□ 2.45
NDST4Q9H3R1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
NDST4Q9H3R1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.32■■■□□ 2.44
NDST4Q9H3R1 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.3■■■□□ 2.44
NDST4Q9H3R1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
NDST4Q9H3R1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
NDST4Q9H3R1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.28■■■□□ 2.44
NDST4Q9H3R1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
NDST4Q9H3R1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
NDST4Q9H3R1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
NDST4Q9H3R1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.26■■■□□ 2.43
NDST4Q9H3R1 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
NDST4Q9H3R1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
NDST4Q9H3R1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
NDST4Q9H3R1 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.23■■■□□ 2.43
NDST4Q9H3R1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.22■■■□□ 2.43
NDST4Q9H3R1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
NDST4Q9H3R1 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
NDST4Q9H3R1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.2■■■□□ 2.43
NDST4Q9H3R1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
NDST4Q9H3R1 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
NDST4Q9H3R1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NDST4Q9H3R1 DYNLL1-208ENST00000550178 581 ntBASIC30.18■■■□□ 2.42
NDST4Q9H3R1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
NDST4Q9H3R1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NDST4Q9H3R1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
NDST4Q9H3R1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
NDST4Q9H3R1 AC120057.4-201ENST00000624722 1615 ntBASIC30.15■■■□□ 2.42
NDST4Q9H3R1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.14■■■□□ 2.42
NDST4Q9H3R1 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
NDST4Q9H3R1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
NDST4Q9H3R1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.1■■■□□ 2.41
NDST4Q9H3R1 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
NDST4Q9H3R1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
NDST4Q9H3R1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
NDST4Q9H3R1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
NDST4Q9H3R1 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.07■■■□□ 2.4
NDST4Q9H3R1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
NDST4Q9H3R1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
NDST4Q9H3R1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.04■■■□□ 2.4
NDST4Q9H3R1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
NDST4Q9H3R1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.04■■■□□ 2.4
NDST4Q9H3R1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
NDST4Q9H3R1 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
NDST4Q9H3R1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
NDST4Q9H3R1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
NDST4Q9H3R1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.01■■■□□ 2.39
NDST4Q9H3R1 AL031258.1-201ENST00000623562 325 ntBASIC30■■■□□ 2.39
NDST4Q9H3R1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30■■■□□ 2.39
NDST4Q9H3R1 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
NDST4Q9H3R1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.99■■■□□ 2.39
NDST4Q9H3R1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.99■■■□□ 2.39
NDST4Q9H3R1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
NDST4Q9H3R1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.97■■■□□ 2.39
NDST4Q9H3R1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
NDST4Q9H3R1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.94■■■□□ 2.38
NDST4Q9H3R1 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.93■■■□□ 2.38
NDST4Q9H3R1 AP002365.1-201ENST00000603448 772 ntBASIC29.93■■■□□ 2.38
NDST4Q9H3R1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
NDST4Q9H3R1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.91■■■□□ 2.38
NDST4Q9H3R1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
NDST4Q9H3R1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
NDST4Q9H3R1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
NDST4Q9H3R1 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
NDST4Q9H3R1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NDST4Q9H3R1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
NDST4Q9H3R1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
NDST4Q9H3R1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
NDST4Q9H3R1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
NDST4Q9H3R1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
NDST4Q9H3R1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
NDST4Q9H3R1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
NDST4Q9H3R1 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
NDST4Q9H3R1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NDST4Q9H3R1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.79■■■□□ 2.36
NDST4Q9H3R1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
NDST4Q9H3R1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.76■■■□□ 2.36
NDST4Q9H3R1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
NDST4Q9H3R1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
NDST4Q9H3R1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.75■■■□□ 2.35
NDST4Q9H3R1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
NDST4Q9H3R1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
NDST4Q9H3R1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.72■■■□□ 2.35
NDST4Q9H3R1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
NDST4Q9H3R1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
NDST4Q9H3R1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
NDST4Q9H3R1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms