Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.55■■■□□ 2.64
RETREG2Q8NC44 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
RETREG2Q8NC44 RPS2P35-201ENST00000443417 897 ntBASIC31.53■■■□□ 2.64
RETREG2Q8NC44 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.53■■■□□ 2.64
RETREG2Q8NC44 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
RETREG2Q8NC44 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
RETREG2Q8NC44 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
RETREG2Q8NC44 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
RETREG2Q8NC44 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.51■■■□□ 2.63
RETREG2Q8NC44 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
RETREG2Q8NC44 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RETREG2Q8NC44 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.47■■■□□ 2.63
RETREG2Q8NC44 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RETREG2Q8NC44 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RETREG2Q8NC44 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RETREG2Q8NC44 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
RETREG2Q8NC44 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RETREG2Q8NC44 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.4■■■□□ 2.62
RETREG2Q8NC44 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RETREG2Q8NC44 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
RETREG2Q8NC44 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.39■■■□□ 2.62
RETREG2Q8NC44 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RETREG2Q8NC44 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
RETREG2Q8NC44 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RETREG2Q8NC44 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
RETREG2Q8NC44 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
RETREG2Q8NC44 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.61
RETREG2Q8NC44 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
RETREG2Q8NC44 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RETREG2Q8NC44 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RETREG2Q8NC44 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RETREG2Q8NC44 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.27■■■□□ 2.6
RETREG2Q8NC44 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RETREG2Q8NC44 CAHM-201ENST00000604200 896 ntBASIC31.25■■■□□ 2.59
RETREG2Q8NC44 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RETREG2Q8NC44 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.24■■■□□ 2.59
RETREG2Q8NC44 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RETREG2Q8NC44 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RETREG2Q8NC44 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.2■■■□□ 2.59
RETREG2Q8NC44 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
RETREG2Q8NC44 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RETREG2Q8NC44 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RETREG2Q8NC44 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
RETREG2Q8NC44 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RETREG2Q8NC44 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.15■■■□□ 2.58
RETREG2Q8NC44 AP006261.1-201ENST00000584783 668 ntBASIC31.12■■■□□ 2.57
RETREG2Q8NC44 AL391121.1-201ENST00000607967 1349 ntBASIC31.12■■■□□ 2.57
RETREG2Q8NC44 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RETREG2Q8NC44 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RETREG2Q8NC44 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
RETREG2Q8NC44 AL162393.1-201ENST00000437852 946 ntBASIC31.1■■■□□ 2.57
RETREG2Q8NC44 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.1■■■□□ 2.57
RETREG2Q8NC44 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.1■■■□□ 2.57
RETREG2Q8NC44 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RETREG2Q8NC44 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RETREG2Q8NC44 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.08■■■□□ 2.57
RETREG2Q8NC44 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.07■■■□□ 2.56
RETREG2Q8NC44 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RETREG2Q8NC44 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RETREG2Q8NC44 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RETREG2Q8NC44 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RETREG2Q8NC44 AL133380.1-201ENST00000506013 324 ntBASIC31.05■■■□□ 2.56
RETREG2Q8NC44 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RETREG2Q8NC44 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
RETREG2Q8NC44 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.03■■■□□ 2.56
RETREG2Q8NC44 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.02■■■□□ 2.56
RETREG2Q8NC44 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RETREG2Q8NC44 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC31■■■□□ 2.55
RETREG2Q8NC44 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
RETREG2Q8NC44 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
RETREG2Q8NC44 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
RETREG2Q8NC44 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
RETREG2Q8NC44 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
RETREG2Q8NC44 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
RETREG2Q8NC44 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.95■■■□□ 2.54
RETREG2Q8NC44 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RETREG2Q8NC44 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.94■■■□□ 2.54
RETREG2Q8NC44 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
RETREG2Q8NC44 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.93■■■□□ 2.54
RETREG2Q8NC44 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
RETREG2Q8NC44 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
RETREG2Q8NC44 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.91■■■□□ 2.54
RETREG2Q8NC44 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.9■■■□□ 2.54
RETREG2Q8NC44 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.9■■■□□ 2.54
RETREG2Q8NC44 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.9■■■□□ 2.54
RETREG2Q8NC44 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
RETREG2Q8NC44 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.9■■■□□ 2.54
RETREG2Q8NC44 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.89■■■□□ 2.54
RETREG2Q8NC44 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
RETREG2Q8NC44 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.88■■■□□ 2.53
RETREG2Q8NC44 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
RETREG2Q8NC44 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
RETREG2Q8NC44 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
RETREG2Q8NC44 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RETREG2Q8NC44 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RETREG2Q8NC44 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
RETREG2Q8NC44 MIR3665-201ENST00000578708 105 ntBASIC30.85■■■□□ 2.53
RETREG2Q8NC44 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
RETREG2Q8NC44 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
RETREG2Q8NC44 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms