Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC37■■■■□ 3.51
CCDC146Q8IYE0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC37■■■■□ 3.51
CCDC146Q8IYE0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
CCDC146Q8IYE0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC36.98■■■■□ 3.51
CCDC146Q8IYE0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC36.98■■■■□ 3.51
CCDC146Q8IYE0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
CCDC146Q8IYE0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC36.97■■■■□ 3.51
CCDC146Q8IYE0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC36.96■■■■□ 3.51
CCDC146Q8IYE0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
CCDC146Q8IYE0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
CCDC146Q8IYE0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC36.9■■■■□ 3.5
CCDC146Q8IYE0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC36.9■■■■□ 3.5
CCDC146Q8IYE0 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC36.9■■■■□ 3.5
CCDC146Q8IYE0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC36.89■■■■□ 3.5
CCDC146Q8IYE0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
CCDC146Q8IYE0 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC36.88■■■■□ 3.49
CCDC146Q8IYE0 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
CCDC146Q8IYE0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC36.85■■■■□ 3.49
CCDC146Q8IYE0 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC36.84■■■■□ 3.49
CCDC146Q8IYE0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC36.83■■■■□ 3.49
CCDC146Q8IYE0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
CCDC146Q8IYE0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
CCDC146Q8IYE0 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
CCDC146Q8IYE0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC36.8■■■■□ 3.48
CCDC146Q8IYE0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
CCDC146Q8IYE0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
CCDC146Q8IYE0 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC36.76■■■■□ 3.48
CCDC146Q8IYE0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC36.76■■■■□ 3.48
CCDC146Q8IYE0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC36.75■■■■□ 3.47
CCDC146Q8IYE0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC36.75■■■■□ 3.47
CCDC146Q8IYE0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC36.74■■■■□ 3.47
CCDC146Q8IYE0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
CCDC146Q8IYE0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
CCDC146Q8IYE0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC36.73■■■■□ 3.47
CCDC146Q8IYE0 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC36.73■■■■□ 3.47
CCDC146Q8IYE0 RARRES2P7-201ENST00000567349 469 ntBASIC36.68■■■■□ 3.46
CCDC146Q8IYE0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC36.67■■■■□ 3.46
CCDC146Q8IYE0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC36.64■■■■□ 3.46
CCDC146Q8IYE0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
CCDC146Q8IYE0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
CCDC146Q8IYE0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC36.62■■■■□ 3.45
CCDC146Q8IYE0 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC36.61■■■■□ 3.45
CCDC146Q8IYE0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC36.6■■■■□ 3.45
CCDC146Q8IYE0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC36.6■■■■□ 3.45
CCDC146Q8IYE0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
CCDC146Q8IYE0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC36.57■■■■□ 3.44
CCDC146Q8IYE0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC36.57■■■■□ 3.44
CCDC146Q8IYE0 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC36.57■■■■□ 3.44
CCDC146Q8IYE0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC36.55■■■■□ 3.44
CCDC146Q8IYE0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC36.55■■■■□ 3.44
CCDC146Q8IYE0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
CCDC146Q8IYE0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
CCDC146Q8IYE0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
CCDC146Q8IYE0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
CCDC146Q8IYE0 SETD8P1-201ENST00000623146 1180 ntBASIC36.52■■■■□ 3.44
CCDC146Q8IYE0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC36.5■■■■□ 3.43
CCDC146Q8IYE0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
CCDC146Q8IYE0 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC36.49■■■■□ 3.43
CCDC146Q8IYE0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
CCDC146Q8IYE0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC36.43■■■■□ 3.42
CCDC146Q8IYE0 AL133380.1-201ENST00000506013 324 ntBASIC36.43■■■■□ 3.42
CCDC146Q8IYE0 AC120057.4-201ENST00000624722 1615 ntBASIC36.43■■■■□ 3.42
CCDC146Q8IYE0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC36.43■■■■□ 3.42
CCDC146Q8IYE0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC36.42■■■■□ 3.42
CCDC146Q8IYE0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
CCDC146Q8IYE0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC36.41■■■■□ 3.42
CCDC146Q8IYE0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC36.41■■■■□ 3.42
CCDC146Q8IYE0 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
CCDC146Q8IYE0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
CCDC146Q8IYE0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CCDC146Q8IYE0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CCDC146Q8IYE0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC36.39■■■■□ 3.42
CCDC146Q8IYE0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
CCDC146Q8IYE0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.42
CCDC146Q8IYE0 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CCDC146Q8IYE0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC36.37■■■■□ 3.41
CCDC146Q8IYE0 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CCDC146Q8IYE0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC36.37■■■■□ 3.41
CCDC146Q8IYE0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
CCDC146Q8IYE0 AC136428.2-201ENST00000563187 214 ntBASIC36.35■■■■□ 3.41
CCDC146Q8IYE0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC36.32■■■■□ 3.4
CCDC146Q8IYE0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC36.31■■■■□ 3.4
CCDC146Q8IYE0 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC36.31■■■■□ 3.4
CCDC146Q8IYE0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
CCDC146Q8IYE0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC36.31■■■■□ 3.4
CCDC146Q8IYE0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
CCDC146Q8IYE0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC36.3■■■■□ 3.4
CCDC146Q8IYE0 AC097358.2-201ENST00000607541 1159 ntBASIC36.29■■■■□ 3.4
CCDC146Q8IYE0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
CCDC146Q8IYE0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
CCDC146Q8IYE0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC36.27■■■■□ 3.4
CCDC146Q8IYE0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
CCDC146Q8IYE0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC36.27■■■■□ 3.4
CCDC146Q8IYE0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC36.26■■■■□ 3.4
CCDC146Q8IYE0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC36.24■■■■□ 3.39
CCDC146Q8IYE0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC36.24■■■■□ 3.39
CCDC146Q8IYE0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
CCDC146Q8IYE0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC36.23■■■■□ 3.39
CCDC146Q8IYE0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
CCDC146Q8IYE0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.38
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms