Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC45.44■■■■■ 4.86
CCDC146Q8IYE0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC44.78■■■■■ 4.76
CCDC146Q8IYE0 AL356512.1-201ENST00000607453 1739 ntBASIC44.26■■■■■ 4.68
CCDC146Q8IYE0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC44.22■■■■■ 4.67
CCDC146Q8IYE0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC43.99■■■■■ 4.63
CCDC146Q8IYE0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC43.91■■■■■ 4.62
CCDC146Q8IYE0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC43.48■■■■■ 4.55
CCDC146Q8IYE0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC43.46■■■■■ 4.55
CCDC146Q8IYE0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC43.23■■■■■ 4.51
CCDC146Q8IYE0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC43.05■■■■■ 4.48
CCDC146Q8IYE0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC42.98■■■■■ 4.47
CCDC146Q8IYE0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC42.81■■■■■ 4.44
CCDC146Q8IYE0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC42.65■■■■■ 4.42
CCDC146Q8IYE0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC42.43■■■■■ 4.38
CCDC146Q8IYE0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC42.37■■■■■ 4.37
CCDC146Q8IYE0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC42.12■■■■■ 4.33
CCDC146Q8IYE0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC41.88■■■■■ 4.3
CCDC146Q8IYE0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC41.88■■■■■ 4.29
CCDC146Q8IYE0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC41.86■■■■■ 4.29
CCDC146Q8IYE0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC41.7■■■■■ 4.27
CCDC146Q8IYE0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC41.67■■■■■ 4.26
CCDC146Q8IYE0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC41.54■■■■■ 4.24
CCDC146Q8IYE0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC41.52■■■■■ 4.24
CCDC146Q8IYE0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC41.34■■■■■ 4.21
CCDC146Q8IYE0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC41.21■■■■■ 4.19
CCDC146Q8IYE0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC41.15■■■■■ 4.18
CCDC146Q8IYE0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC41.13■■■■■ 4.18
CCDC146Q8IYE0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC41.06■■■■■ 4.16
CCDC146Q8IYE0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC40.95■■■■■ 4.15
CCDC146Q8IYE0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.12
CCDC146Q8IYE0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC40.71■■■■■ 4.11
CCDC146Q8IYE0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC40.69■■■■■ 4.1
CCDC146Q8IYE0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC40.65■■■■■ 4.1
CCDC146Q8IYE0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC40.65■■■■■ 4.1
CCDC146Q8IYE0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
CCDC146Q8IYE0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC40.59■■■■■ 4.09
CCDC146Q8IYE0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC40.59■■■■■ 4.09
CCDC146Q8IYE0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.08
CCDC146Q8IYE0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC40.54■■■■■ 4.08
CCDC146Q8IYE0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC40.49■■■■■ 4.07
CCDC146Q8IYE0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
CCDC146Q8IYE0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC40.41■■■■■ 4.06
CCDC146Q8IYE0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC40.37■■■■■ 4.05
CCDC146Q8IYE0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC40.35■■■■■ 4.05
CCDC146Q8IYE0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC40.35■■■■■ 4.05
CCDC146Q8IYE0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC40.1■■■■■ 4.01
CCDC146Q8IYE0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC40.09■■■■■ 4.01
CCDC146Q8IYE0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC40.04■■■■■ 4
CCDC146Q8IYE0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC40.02■■■■■ 4
CCDC146Q8IYE0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC39.96■■■■□ 3.99
CCDC146Q8IYE0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC39.93■■■■□ 3.98
CCDC146Q8IYE0 AC015813.7-201ENST00000623294 581 ntBASIC39.82■■■■□ 3.97
CCDC146Q8IYE0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
CCDC146Q8IYE0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC39.75■■■■□ 3.95
CCDC146Q8IYE0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC39.66■■■■□ 3.94
CCDC146Q8IYE0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC39.6■■■■□ 3.93
CCDC146Q8IYE0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
CCDC146Q8IYE0 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC39.49■■■■□ 3.91
CCDC146Q8IYE0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
CCDC146Q8IYE0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
CCDC146Q8IYE0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC39.39■■■■□ 3.9
CCDC146Q8IYE0 ILK-212ENST00000532063 1617 ntTSL 2 BASIC39.37■■■■□ 3.89
CCDC146Q8IYE0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC39.37■■■■□ 3.89
CCDC146Q8IYE0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
CCDC146Q8IYE0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
CCDC146Q8IYE0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC39.3■■■■□ 3.88
CCDC146Q8IYE0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC39.3■■■■□ 3.88
CCDC146Q8IYE0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
CCDC146Q8IYE0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC39.24■■■■□ 3.87
CCDC146Q8IYE0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC39.23■■■■□ 3.87
CCDC146Q8IYE0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
CCDC146Q8IYE0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
CCDC146Q8IYE0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC39.2■■■■□ 3.87
CCDC146Q8IYE0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
CCDC146Q8IYE0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
CCDC146Q8IYE0 AC006077.2-201ENST00000623591 457 ntBASIC39.08■■■■□ 3.85
CCDC146Q8IYE0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC39.03■■■■□ 3.84
CCDC146Q8IYE0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC39.01■■■■□ 3.83
CCDC146Q8IYE0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
CCDC146Q8IYE0 ZNRF2P1-201ENST00000441407 443 ntBASIC38.92■■■■□ 3.82
CCDC146Q8IYE0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC38.91■■■■□ 3.82
CCDC146Q8IYE0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC38.9■■■■□ 3.82
CCDC146Q8IYE0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC38.81■■■■□ 3.8
CCDC146Q8IYE0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
CCDC146Q8IYE0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC38.77■■■■□ 3.8
CCDC146Q8IYE0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
CCDC146Q8IYE0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
CCDC146Q8IYE0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC38.72■■■■□ 3.79
CCDC146Q8IYE0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC38.65■■■■□ 3.78
CCDC146Q8IYE0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
CCDC146Q8IYE0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
CCDC146Q8IYE0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC38.57■■■■□ 3.77
CCDC146Q8IYE0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC38.55■■■■□ 3.76
CCDC146Q8IYE0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC38.55■■■■□ 3.76
CCDC146Q8IYE0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
CCDC146Q8IYE0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC38.51■■■■□ 3.76
CCDC146Q8IYE0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC38.5■■■■□ 3.75
CCDC146Q8IYE0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC38.48■■■■□ 3.75
CCDC146Q8IYE0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
CCDC146Q8IYE0 AC145285.7-201ENST00000614819 1539 ntBASIC38.48■■■■□ 3.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms