Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.79■■□□□ 1.88
ATP6AP1LQ52LC2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ATP6AP1LQ52LC2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP6AP1LQ52LC2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP6AP1LQ52LC2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.77■■□□□ 1.88
ATP6AP1LQ52LC2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.76■■□□□ 1.87
ATP6AP1LQ52LC2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6AP1LQ52LC2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6AP1LQ52LC2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
ATP6AP1LQ52LC2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.74■■□□□ 1.87
ATP6AP1LQ52LC2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6AP1LQ52LC2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6AP1LQ52LC2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATP6AP1LQ52LC2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ATP6AP1LQ52LC2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ATP6AP1LQ52LC2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.71■■□□□ 1.87
ATP6AP1LQ52LC2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ATP6AP1LQ52LC2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
ATP6AP1LQ52LC2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ATP6AP1LQ52LC2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ATP6AP1LQ52LC2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.66■■□□□ 1.86
ATP6AP1LQ52LC2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.66■■□□□ 1.86
ATP6AP1LQ52LC2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ATP6AP1LQ52LC2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
ATP6AP1LQ52LC2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
ATP6AP1LQ52LC2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.64■■□□□ 1.86
ATP6AP1LQ52LC2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
ATP6AP1LQ52LC2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.64■■□□□ 1.85
ATP6AP1LQ52LC2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
ATP6AP1LQ52LC2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ATP6AP1LQ52LC2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.63■■□□□ 1.85
ATP6AP1LQ52LC2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ATP6AP1LQ52LC2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ATP6AP1LQ52LC2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ATP6AP1LQ52LC2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
ATP6AP1LQ52LC2 ZNRF2P1-201ENST00000441407 443 ntBASIC26.61■■□□□ 1.85
ATP6AP1LQ52LC2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
ATP6AP1LQ52LC2 AC120057.4-201ENST00000624722 1615 ntBASIC26.61■■□□□ 1.85
ATP6AP1LQ52LC2 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.6■■□□□ 1.85
ATP6AP1LQ52LC2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.58■■□□□ 1.85
ATP6AP1LQ52LC2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ATP6AP1LQ52LC2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.58■■□□□ 1.85
ATP6AP1LQ52LC2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
ATP6AP1LQ52LC2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ATP6AP1LQ52LC2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.55■■□□□ 1.84
ATP6AP1LQ52LC2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ATP6AP1LQ52LC2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ATP6AP1LQ52LC2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ATP6AP1LQ52LC2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
ATP6AP1LQ52LC2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ATP6AP1LQ52LC2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
ATP6AP1LQ52LC2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ATP6AP1LQ52LC2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.45■■□□□ 1.82
ATP6AP1LQ52LC2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.44■■□□□ 1.82
ATP6AP1LQ52LC2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
ATP6AP1LQ52LC2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
ATP6AP1LQ52LC2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.43■■□□□ 1.82
ATP6AP1LQ52LC2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ATP6AP1LQ52LC2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ATP6AP1LQ52LC2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.42■■□□□ 1.82
ATP6AP1LQ52LC2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ATP6AP1LQ52LC2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.41■■□□□ 1.82
ATP6AP1LQ52LC2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ATP6AP1LQ52LC2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ATP6AP1LQ52LC2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
ATP6AP1LQ52LC2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ATP6AP1LQ52LC2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ATP6AP1LQ52LC2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.38■■□□□ 1.81
ATP6AP1LQ52LC2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
ATP6AP1LQ52LC2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.37■■□□□ 1.81
ATP6AP1LQ52LC2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.36■■□□□ 1.81
ATP6AP1LQ52LC2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATP6AP1LQ52LC2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ATP6AP1LQ52LC2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATP6AP1LQ52LC2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.33■■□□□ 1.81
ATP6AP1LQ52LC2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATP6AP1LQ52LC2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATP6AP1LQ52LC2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATP6AP1LQ52LC2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATP6AP1LQ52LC2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ATP6AP1LQ52LC2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ATP6AP1LQ52LC2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ATP6AP1LQ52LC2 DYNLL1-208ENST00000550178 581 ntBASIC26.3■■□□□ 1.8
ATP6AP1LQ52LC2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ATP6AP1LQ52LC2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.28■■□□□ 1.8
ATP6AP1LQ52LC2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP6AP1LQ52LC2 ABCB10P1-201ENST00000614297 2181 ntBASIC26.25■■□□□ 1.79
ATP6AP1LQ52LC2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
ATP6AP1LQ52LC2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.24■■□□□ 1.79
ATP6AP1LQ52LC2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATP6AP1LQ52LC2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ATP6AP1LQ52LC2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.22■■□□□ 1.79
ATP6AP1LQ52LC2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.22■■□□□ 1.79
ATP6AP1LQ52LC2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATP6AP1LQ52LC2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATP6AP1LQ52LC2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
ATP6AP1LQ52LC2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.19■■□□□ 1.78
ATP6AP1LQ52LC2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ATP6AP1LQ52LC2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ATP6AP1LQ52LC2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms