Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.79■■□□□ 1.88
ATP6AP1LQ52LC2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ATP6AP1LQ52LC2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP6AP1LQ52LC2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP6AP1LQ52LC2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.77■■□□□ 1.88
ATP6AP1LQ52LC2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.76■■□□□ 1.87
ATP6AP1LQ52LC2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6AP1LQ52LC2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6AP1LQ52LC2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
ATP6AP1LQ52LC2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.74■■□□□ 1.87
ATP6AP1LQ52LC2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6AP1LQ52LC2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6AP1LQ52LC2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATP6AP1LQ52LC2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ATP6AP1LQ52LC2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ATP6AP1LQ52LC2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.71■■□□□ 1.87
ATP6AP1LQ52LC2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ATP6AP1LQ52LC2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
ATP6AP1LQ52LC2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ATP6AP1LQ52LC2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ATP6AP1LQ52LC2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.66■■□□□ 1.86
ATP6AP1LQ52LC2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.66■■□□□ 1.86
ATP6AP1LQ52LC2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ATP6AP1LQ52LC2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
ATP6AP1LQ52LC2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
ATP6AP1LQ52LC2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.64■■□□□ 1.86
ATP6AP1LQ52LC2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
ATP6AP1LQ52LC2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.64■■□□□ 1.85
ATP6AP1LQ52LC2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
ATP6AP1LQ52LC2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ATP6AP1LQ52LC2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.63■■□□□ 1.85
ATP6AP1LQ52LC2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ATP6AP1LQ52LC2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ATP6AP1LQ52LC2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ATP6AP1LQ52LC2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
ATP6AP1LQ52LC2 ZNRF2P1-201ENST00000441407 443 ntBASIC26.61■■□□□ 1.85
ATP6AP1LQ52LC2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
ATP6AP1LQ52LC2 AC120057.4-201ENST00000624722 1615 ntBASIC26.61■■□□□ 1.85
ATP6AP1LQ52LC2 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.6■■□□□ 1.85
ATP6AP1LQ52LC2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.58■■□□□ 1.85
ATP6AP1LQ52LC2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ATP6AP1LQ52LC2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.58■■□□□ 1.85
ATP6AP1LQ52LC2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
ATP6AP1LQ52LC2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ATP6AP1LQ52LC2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.55■■□□□ 1.84
ATP6AP1LQ52LC2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ATP6AP1LQ52LC2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ATP6AP1LQ52LC2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ATP6AP1LQ52LC2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
ATP6AP1LQ52LC2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ATP6AP1LQ52LC2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
ATP6AP1LQ52LC2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ATP6AP1LQ52LC2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.45■■□□□ 1.82
ATP6AP1LQ52LC2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.44■■□□□ 1.82
ATP6AP1LQ52LC2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
ATP6AP1LQ52LC2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
ATP6AP1LQ52LC2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.43■■□□□ 1.82
ATP6AP1LQ52LC2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ATP6AP1LQ52LC2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ATP6AP1LQ52LC2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.42■■□□□ 1.82
ATP6AP1LQ52LC2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ATP6AP1LQ52LC2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.41■■□□□ 1.82
ATP6AP1LQ52LC2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ATP6AP1LQ52LC2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ATP6AP1LQ52LC2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
ATP6AP1LQ52LC2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ATP6AP1LQ52LC2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ATP6AP1LQ52LC2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.38■■□□□ 1.81
ATP6AP1LQ52LC2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
ATP6AP1LQ52LC2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.37■■□□□ 1.81
ATP6AP1LQ52LC2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.36■■□□□ 1.81
ATP6AP1LQ52LC2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATP6AP1LQ52LC2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ATP6AP1LQ52LC2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATP6AP1LQ52LC2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.33■■□□□ 1.81
ATP6AP1LQ52LC2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATP6AP1LQ52LC2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATP6AP1LQ52LC2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATP6AP1LQ52LC2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATP6AP1LQ52LC2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ATP6AP1LQ52LC2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
ATP6AP1LQ52LC2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ATP6AP1LQ52LC2 DYNLL1-208ENST00000550178 581 ntBASIC26.3■■□□□ 1.8
ATP6AP1LQ52LC2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ATP6AP1LQ52LC2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.28■■□□□ 1.8
ATP6AP1LQ52LC2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP6AP1LQ52LC2 ABCB10P1-201ENST00000614297 2181 ntBASIC26.25■■□□□ 1.79
ATP6AP1LQ52LC2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
ATP6AP1LQ52LC2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.24■■□□□ 1.79
ATP6AP1LQ52LC2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATP6AP1LQ52LC2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ATP6AP1LQ52LC2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.22■■□□□ 1.79
ATP6AP1LQ52LC2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.22■■□□□ 1.79
ATP6AP1LQ52LC2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATP6AP1LQ52LC2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATP6AP1LQ52LC2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
ATP6AP1LQ52LC2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.19■■□□□ 1.78
ATP6AP1LQ52LC2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ATP6AP1LQ52LC2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ATP6AP1LQ52LC2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms