Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.64■■□□□ 1.86
CCNYL3P0C7X3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCNYL3P0C7X3 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
CCNYL3P0C7X3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.59■■□□□ 1.85
CCNYL3P0C7X3 SUZ12P1-203ENST00000578195 985 ntBASIC26.59■■□□□ 1.85
CCNYL3P0C7X3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCNYL3P0C7X3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCNYL3P0C7X3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CCNYL3P0C7X3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
CCNYL3P0C7X3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.57■■□□□ 1.84
CCNYL3P0C7X3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCNYL3P0C7X3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CCNYL3P0C7X3 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCNYL3P0C7X3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.56■■□□□ 1.84
CCNYL3P0C7X3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCNYL3P0C7X3 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCNYL3P0C7X3 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCNYL3P0C7X3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCNYL3P0C7X3 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCNYL3P0C7X3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
CCNYL3P0C7X3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCNYL3P0C7X3 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCNYL3P0C7X3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCNYL3P0C7X3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCNYL3P0C7X3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.48■■□□□ 1.83
CCNYL3P0C7X3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCNYL3P0C7X3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCNYL3P0C7X3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.46■■□□□ 1.83
CCNYL3P0C7X3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCNYL3P0C7X3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CCNYL3P0C7X3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CCNYL3P0C7X3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CCNYL3P0C7X3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCNYL3P0C7X3 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CCNYL3P0C7X3 CAHM-201ENST00000604200 896 ntBASIC26.41■■□□□ 1.82
CCNYL3P0C7X3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCNYL3P0C7X3 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCNYL3P0C7X3 RPS2P35-201ENST00000443417 897 ntBASIC26.4■■□□□ 1.82
CCNYL3P0C7X3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCNYL3P0C7X3 AL133380.1-201ENST00000506013 324 ntBASIC26.39■■□□□ 1.82
CCNYL3P0C7X3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCNYL3P0C7X3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.37■■□□□ 1.81
CCNYL3P0C7X3 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCNYL3P0C7X3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.36■■□□□ 1.81
CCNYL3P0C7X3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
CCNYL3P0C7X3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.35■■□□□ 1.81
CCNYL3P0C7X3 AL391121.1-201ENST00000607967 1349 ntBASIC26.35■■□□□ 1.81
CCNYL3P0C7X3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.33■■□□□ 1.81
CCNYL3P0C7X3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCNYL3P0C7X3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CCNYL3P0C7X3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CCNYL3P0C7X3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CCNYL3P0C7X3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CCNYL3P0C7X3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CCNYL3P0C7X3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCNYL3P0C7X3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCNYL3P0C7X3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCNYL3P0C7X3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCNYL3P0C7X3 AP006261.1-201ENST00000584783 668 ntBASIC26.26■■□□□ 1.79
CCNYL3P0C7X3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCNYL3P0C7X3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
CCNYL3P0C7X3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.23■■□□□ 1.79
CCNYL3P0C7X3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCNYL3P0C7X3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
CCNYL3P0C7X3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.21■■□□□ 1.79
CCNYL3P0C7X3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCNYL3P0C7X3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
CCNYL3P0C7X3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.2■■□□□ 1.78
CCNYL3P0C7X3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCNYL3P0C7X3 AL162393.1-201ENST00000437852 946 ntBASIC26.17■■□□□ 1.78
CCNYL3P0C7X3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.17■■□□□ 1.78
CCNYL3P0C7X3 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.16■■□□□ 1.78
CCNYL3P0C7X3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CCNYL3P0C7X3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CCNYL3P0C7X3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCNYL3P0C7X3 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.15■■□□□ 1.78
CCNYL3P0C7X3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CCNYL3P0C7X3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.13■■□□□ 1.77
CCNYL3P0C7X3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CCNYL3P0C7X3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CCNYL3P0C7X3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
CCNYL3P0C7X3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.1■■□□□ 1.77
CCNYL3P0C7X3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.09■■□□□ 1.77
CCNYL3P0C7X3 MIR3665-201ENST00000578708 105 ntBASIC26.09■■□□□ 1.77
CCNYL3P0C7X3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CCNYL3P0C7X3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.09■■□□□ 1.77
CCNYL3P0C7X3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCNYL3P0C7X3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CCNYL3P0C7X3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCNYL3P0C7X3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CCNYL3P0C7X3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CCNYL3P0C7X3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCNYL3P0C7X3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.06■■□□□ 1.76
CCNYL3P0C7X3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
CCNYL3P0C7X3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCNYL3P0C7X3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.06■■□□□ 1.76
CCNYL3P0C7X3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.06■■□□□ 1.76
CCNYL3P0C7X3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.05■■□□□ 1.76
CCNYL3P0C7X3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCNYL3P0C7X3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms