Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
CCNYL3P0C7X3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.01■■■□□ 2.71
CCNYL3P0C7X3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCNYL3P0C7X3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCNYL3P0C7X3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCNYL3P0C7X3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC31.5■■■□□ 2.63
CCNYL3P0C7X3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
CCNYL3P0C7X3 AL356512.1-201ENST00000607453 1739 ntBASIC31.29■■■□□ 2.6
CCNYL3P0C7X3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
CCNYL3P0C7X3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC30.59■■■□□ 2.49
CCNYL3P0C7X3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.53■■■□□ 2.48
CCNYL3P0C7X3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.48
CCNYL3P0C7X3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.49■■■□□ 2.47
CCNYL3P0C7X3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
CCNYL3P0C7X3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.44■■■□□ 2.46
CCNYL3P0C7X3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.36■■■□□ 2.45
CCNYL3P0C7X3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.33■■■□□ 2.45
CCNYL3P0C7X3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCNYL3P0C7X3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
CCNYL3P0C7X3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CCNYL3P0C7X3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.07■■■□□ 2.4
CCNYL3P0C7X3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CCNYL3P0C7X3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.97■■■□□ 2.39
CCNYL3P0C7X3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CCNYL3P0C7X3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
CCNYL3P0C7X3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
CCNYL3P0C7X3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CCNYL3P0C7X3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CCNYL3P0C7X3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
CCNYL3P0C7X3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC29.69■■■□□ 2.34
CCNYL3P0C7X3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCNYL3P0C7X3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCNYL3P0C7X3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC29.45■■■□□ 2.31
CCNYL3P0C7X3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCNYL3P0C7X3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CCNYL3P0C7X3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CCNYL3P0C7X3 AC006077.2-201ENST00000623591 457 ntBASIC29.08■■■□□ 2.25
CCNYL3P0C7X3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.07■■■□□ 2.24
CCNYL3P0C7X3 AC015813.7-201ENST00000623294 581 ntBASIC29.07■■■□□ 2.24
CCNYL3P0C7X3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.05■■■□□ 2.24
CCNYL3P0C7X3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.05■■■□□ 2.24
CCNYL3P0C7X3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.03■■■□□ 2.24
CCNYL3P0C7X3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.02■■■□□ 2.24
CCNYL3P0C7X3 ZNRF2P1-201ENST00000441407 443 ntBASIC29■■■□□ 2.23
CCNYL3P0C7X3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
CCNYL3P0C7X3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
CCNYL3P0C7X3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
CCNYL3P0C7X3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CCNYL3P0C7X3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCNYL3P0C7X3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.89■■■□□ 2.21
CCNYL3P0C7X3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCNYL3P0C7X3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CCNYL3P0C7X3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
CCNYL3P0C7X3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
CCNYL3P0C7X3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CCNYL3P0C7X3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
CCNYL3P0C7X3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CCNYL3P0C7X3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.57■■■□□ 2.16
CCNYL3P0C7X3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
CCNYL3P0C7X3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CCNYL3P0C7X3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CCNYL3P0C7X3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCNYL3P0C7X3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CCNYL3P0C7X3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
CCNYL3P0C7X3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CCNYL3P0C7X3 AP002365.1-201ENST00000603448 772 ntBASIC28.28■■■□□ 2.12
CCNYL3P0C7X3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CCNYL3P0C7X3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.25■■■□□ 2.11
CCNYL3P0C7X3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCNYL3P0C7X3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.19■■■□□ 2.1
CCNYL3P0C7X3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CCNYL3P0C7X3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.16■■■□□ 2.1
CCNYL3P0C7X3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CCNYL3P0C7X3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CCNYL3P0C7X3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
CCNYL3P0C7X3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
CCNYL3P0C7X3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CCNYL3P0C7X3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.07■■■□□ 2.08
CCNYL3P0C7X3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CCNYL3P0C7X3 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.07■■■□□ 2.08
CCNYL3P0C7X3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
CCNYL3P0C7X3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
CCNYL3P0C7X3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.05■■■□□ 2.08
CCNYL3P0C7X3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.02■■■□□ 2.08
CCNYL3P0C7X3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.01■■■□□ 2.07
CCNYL3P0C7X3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.99■■■□□ 2.07
CCNYL3P0C7X3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
CCNYL3P0C7X3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.97■■■□□ 2.07
CCNYL3P0C7X3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.93■■■□□ 2.06
CCNYL3P0C7X3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.93■■■□□ 2.06
CCNYL3P0C7X3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CCNYL3P0C7X3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.92■■■□□ 2.06
CCNYL3P0C7X3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
CCNYL3P0C7X3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
CCNYL3P0C7X3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC27.84■■■□□ 2.05
CCNYL3P0C7X3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
CCNYL3P0C7X3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
CCNYL3P0C7X3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CCNYL3P0C7X3 DYNLL1-208ENST00000550178 581 ntBASIC27.77■■■□□ 2.04
CCNYL3P0C7X3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms