Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TDP2O95551 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
TDP2O95551 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.66■■■□□ 2.66
TDP2O95551 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TDP2O95551 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.64■■■□□ 2.66
TDP2O95551 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
TDP2O95551 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TDP2O95551 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
TDP2O95551 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.57■■■□□ 2.64
TDP2O95551 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.56■■■□□ 2.64
TDP2O95551 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.56■■■□□ 2.64
TDP2O95551 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
TDP2O95551 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.56■■■□□ 2.64
TDP2O95551 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.55■■■□□ 2.64
TDP2O95551 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
TDP2O95551 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.54■■■□□ 2.64
TDP2O95551 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TDP2O95551 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TDP2O95551 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.52■■■□□ 2.64
TDP2O95551 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
TDP2O95551 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
TDP2O95551 RARRES2P7-201ENST00000567349 469 ntBASIC31.5■■■□□ 2.63
TDP2O95551 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
TDP2O95551 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.48■■■□□ 2.63
TDP2O95551 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
TDP2O95551 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.47■■■□□ 2.63
TDP2O95551 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TDP2O95551 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TDP2O95551 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
TDP2O95551 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.43■■■□□ 2.62
TDP2O95551 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TDP2O95551 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
TDP2O95551 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.42■■■□□ 2.62
TDP2O95551 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.41■■■□□ 2.62
TDP2O95551 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TDP2O95551 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
TDP2O95551 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TDP2O95551 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TDP2O95551 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TDP2O95551 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.36■■■□□ 2.61
TDP2O95551 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TDP2O95551 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
TDP2O95551 SETD8P1-201ENST00000623146 1180 ntBASIC31.35■■■□□ 2.61
TDP2O95551 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TDP2O95551 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TDP2O95551 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TDP2O95551 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TDP2O95551 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.27■■■□□ 2.6
TDP2O95551 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
TDP2O95551 AL133380.1-201ENST00000506013 324 ntBASIC31.25■■■□□ 2.59
TDP2O95551 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.25■■■□□ 2.59
TDP2O95551 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
TDP2O95551 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.24■■■□□ 2.59
TDP2O95551 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
TDP2O95551 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.24■■■□□ 2.59
TDP2O95551 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
TDP2O95551 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
TDP2O95551 AC136428.2-201ENST00000563187 214 ntBASIC31.2■■■□□ 2.59
TDP2O95551 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.18■■■□□ 2.58
TDP2O95551 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.18■■■□□ 2.58
TDP2O95551 AC097358.2-201ENST00000607541 1159 ntBASIC31.17■■■□□ 2.58
TDP2O95551 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
TDP2O95551 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TDP2O95551 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
TDP2O95551 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
TDP2O95551 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TDP2O95551 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TDP2O95551 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.14■■■□□ 2.58
TDP2O95551 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
TDP2O95551 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TDP2O95551 AC120057.4-201ENST00000624722 1615 ntBASIC31.12■■■□□ 2.57
TDP2O95551 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.1■■■□□ 2.57
TDP2O95551 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.1■■■□□ 2.57
TDP2O95551 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.09■■■□□ 2.57
TDP2O95551 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.09■■■□□ 2.57
TDP2O95551 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
TDP2O95551 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.07■■■□□ 2.56
TDP2O95551 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.07■■■□□ 2.56
TDP2O95551 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TDP2O95551 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
TDP2O95551 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.05■■■□□ 2.56
TDP2O95551 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.05■■■□□ 2.56
TDP2O95551 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
TDP2O95551 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
TDP2O95551 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
TDP2O95551 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
TDP2O95551 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TDP2O95551 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31■■■□□ 2.55
TDP2O95551 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TDP2O95551 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31■■■□□ 2.55
TDP2O95551 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TDP2O95551 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
TDP2O95551 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
TDP2O95551 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.99■■■□□ 2.55
TDP2O95551 CAHM-201ENST00000604200 896 ntBASIC30.99■■■□□ 2.55
TDP2O95551 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
TDP2O95551 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TDP2O95551 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.98■■■□□ 2.55
TDP2O95551 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
TDP2O95551 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms