Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDH17O14917 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDH17O14917 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.4■■□□□ 1.82
PCDH17O14917 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PCDH17O14917 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.39■■□□□ 1.82
PCDH17O14917 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.38■■□□□ 1.81
PCDH17O14917 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDH17O14917 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDH17O14917 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
PCDH17O14917 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDH17O14917 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDH17O14917 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDH17O14917 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDH17O14917 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
PCDH17O14917 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDH17O14917 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDH17O14917 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDH17O14917 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PCDH17O14917 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDH17O14917 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDH17O14917 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDH17O14917 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.31■■□□□ 1.8
PCDH17O14917 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDH17O14917 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.3■■□□□ 1.8
PCDH17O14917 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.29■■□□□ 1.8
PCDH17O14917 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
PCDH17O14917 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDH17O14917 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH17O14917 SETD8P1-201ENST00000623146 1180 ntBASIC26.24■■□□□ 1.79
PCDH17O14917 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH17O14917 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
PCDH17O14917 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
PCDH17O14917 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDH17O14917 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.2■■□□□ 1.78
PCDH17O14917 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDH17O14917 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDH17O14917 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDH17O14917 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDH17O14917 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC26.18■■□□□ 1.78
PCDH17O14917 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDH17O14917 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH17O14917 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDH17O14917 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDH17O14917 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.17■■□□□ 1.78
PCDH17O14917 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.16■■□□□ 1.78
PCDH17O14917 AC097358.2-201ENST00000607541 1159 ntBASIC26.16■■□□□ 1.78
PCDH17O14917 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDH17O14917 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.13■■□□□ 1.77
PCDH17O14917 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDH17O14917 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
PCDH17O14917 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.11■■□□□ 1.77
PCDH17O14917 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH17O14917 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH17O14917 AC136428.2-201ENST00000563187 214 ntBASIC26.08■■□□□ 1.77
PCDH17O14917 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
PCDH17O14917 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDH17O14917 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDH17O14917 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDH17O14917 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PCDH17O14917 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDH17O14917 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PCDH17O14917 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDH17O14917 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDH17O14917 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.03■■□□□ 1.76
PCDH17O14917 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.02■■□□□ 1.76
PCDH17O14917 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
PCDH17O14917 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDH17O14917 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.01■■□□□ 1.75
PCDH17O14917 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDH17O14917 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDH17O14917 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH17O14917 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH17O14917 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDH17O14917 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDH17O14917 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.97■■□□□ 1.75
PCDH17O14917 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.97■■□□□ 1.75
PCDH17O14917 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH17O14917 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH17O14917 AL133380.1-201ENST00000506013 324 ntBASIC25.96■■□□□ 1.75
PCDH17O14917 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDH17O14917 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCDH17O14917 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.95■■□□□ 1.74
PCDH17O14917 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
PCDH17O14917 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDH17O14917 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDH17O14917 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.94■■□□□ 1.74
PCDH17O14917 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDH17O14917 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDH17O14917 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDH17O14917 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PCDH17O14917 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
PCDH17O14917 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PCDH17O14917 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDH17O14917 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.91■■□□□ 1.74
PCDH17O14917 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.9■■□□□ 1.74
PCDH17O14917 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDH17O14917 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PCDH17O14917 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PCDH17O14917 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.89■■□□□ 1.73
PCDH17O14917 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms