Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
SIRPB1O00241 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
SIRPB1O00241 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
SIRPB1O00241 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SIRPB1O00241 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
SIRPB1O00241 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SIRPB1O00241 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.36■■□□□ 1.33
SIRPB1O00241 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC23.36■■□□□ 1.33
SIRPB1O00241 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
SIRPB1O00241 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC23.35■■□□□ 1.33
SIRPB1O00241 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SIRPB1O00241 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SIRPB1O00241 AP002365.1-201ENST00000603448 772 ntBASIC23.33■■□□□ 1.33
SIRPB1O00241 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SIRPB1O00241 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SIRPB1O00241 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SIRPB1O00241 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.31■■□□□ 1.32
SIRPB1O00241 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SIRPB1O00241 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SIRPB1O00241 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.3■■□□□ 1.32
SIRPB1O00241 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
SIRPB1O00241 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
SIRPB1O00241 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.28■■□□□ 1.32
SIRPB1O00241 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SIRPB1O00241 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
SIRPB1O00241 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SIRPB1O00241 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
SIRPB1O00241 AL031258.1-201ENST00000623562 325 ntBASIC23.26■■□□□ 1.31
SIRPB1O00241 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SIRPB1O00241 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SIRPB1O00241 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SIRPB1O00241 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.23■■□□□ 1.31
SIRPB1O00241 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SIRPB1O00241 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.22■■□□□ 1.31
SIRPB1O00241 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SIRPB1O00241 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SIRPB1O00241 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.2■■□□□ 1.3
SIRPB1O00241 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.2■■□□□ 1.3
SIRPB1O00241 EBPL-203ENST00000378270 579 ntTSL 2 BASIC23.2■■□□□ 1.3
SIRPB1O00241 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.19■■□□□ 1.3
SIRPB1O00241 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.18■■□□□ 1.3
SIRPB1O00241 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.18■■□□□ 1.3
SIRPB1O00241 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
SIRPB1O00241 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SIRPB1O00241 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SIRPB1O00241 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SIRPB1O00241 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SIRPB1O00241 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SIRPB1O00241 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SIRPB1O00241 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SIRPB1O00241 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SIRPB1O00241 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.14■■□□□ 1.3
SIRPB1O00241 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.14■■□□□ 1.3
SIRPB1O00241 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SIRPB1O00241 AC120057.4-201ENST00000624722 1615 ntBASIC23.14■■□□□ 1.29
SIRPB1O00241 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.13■■□□□ 1.29
SIRPB1O00241 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC23.11■■□□□ 1.29
SIRPB1O00241 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SIRPB1O00241 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIRPB1O00241 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SIRPB1O00241 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
SIRPB1O00241 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC23.1■■□□□ 1.29
SIRPB1O00241 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.1■■□□□ 1.29
SIRPB1O00241 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SIRPB1O00241 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SIRPB1O00241 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SIRPB1O00241 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SIRPB1O00241 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SIRPB1O00241 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SIRPB1O00241 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SIRPB1O00241 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.06■■□□□ 1.28
SIRPB1O00241 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SIRPB1O00241 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SIRPB1O00241 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.03■■□□□ 1.28
SIRPB1O00241 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SIRPB1O00241 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23■■□□□ 1.27
SIRPB1O00241 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SIRPB1O00241 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SIRPB1O00241 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SIRPB1O00241 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SIRPB1O00241 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC22.98■■□□□ 1.27
SIRPB1O00241 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC22.98■■□□□ 1.27
SIRPB1O00241 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SIRPB1O00241 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
SIRPB1O00241 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SIRPB1O00241 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SIRPB1O00241 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC22.93■■□□□ 1.26
SIRPB1O00241 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SIRPB1O00241 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
SIRPB1O00241 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SIRPB1O00241 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.91■■□□□ 1.26
SIRPB1O00241 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.91■■□□□ 1.26
SIRPB1O00241 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SIRPB1O00241 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SIRPB1O00241 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
SIRPB1O00241 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SIRPB1O00241 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SIRPB1O00241 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC22.89■■□□□ 1.26
SIRPB1O00241 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
SIRPB1O00241 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms