Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LINC01548A6NM66 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
LINC01548A6NM66 RARRES2P7-201ENST00000567349 469 ntBASIC22■■□□□ 1.11
LINC01548A6NM66 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22■■□□□ 1.11
LINC01548A6NM66 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
LINC01548A6NM66 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
LINC01548A6NM66 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
LINC01548A6NM66 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LINC01548A6NM66 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.96■■□□□ 1.11
LINC01548A6NM66 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LINC01548A6NM66 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC21.95■■□□□ 1.11
LINC01548A6NM66 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC01548A6NM66 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC01548A6NM66 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.95■■□□□ 1.1
LINC01548A6NM66 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC01548A6NM66 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINC01548A6NM66 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.92■■□□□ 1.1
LINC01548A6NM66 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC01548A6NM66 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC01548A6NM66 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC01548A6NM66 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.91■■□□□ 1.1
LINC01548A6NM66 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.91■■□□□ 1.1
LINC01548A6NM66 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01548A6NM66 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01548A6NM66 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
LINC01548A6NM66 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC01548A6NM66 SETD8P1-201ENST00000623146 1180 ntBASIC21.88■■□□□ 1.09
LINC01548A6NM66 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LINC01548A6NM66 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.87■■□□□ 1.09
LINC01548A6NM66 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC01548A6NM66 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC01548A6NM66 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LINC01548A6NM66 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
LINC01548A6NM66 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC01548A6NM66 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.83■■□□□ 1.09
LINC01548A6NM66 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC01548A6NM66 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LINC01548A6NM66 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LINC01548A6NM66 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
LINC01548A6NM66 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.81■■□□□ 1.08
LINC01548A6NM66 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.81■■□□□ 1.08
LINC01548A6NM66 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.8■■□□□ 1.08
LINC01548A6NM66 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.8■■□□□ 1.08
LINC01548A6NM66 AC097358.2-201ENST00000607541 1159 ntBASIC21.79■■□□□ 1.08
LINC01548A6NM66 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.79■■□□□ 1.08
LINC01548A6NM66 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.79■■□□□ 1.08
LINC01548A6NM66 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC01548A6NM66 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINC01548A6NM66 AC136428.2-201ENST00000563187 214 ntBASIC21.77■■□□□ 1.08
LINC01548A6NM66 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC01548A6NM66 AL133380.1-201ENST00000506013 324 ntBASIC21.76■■□□□ 1.07
LINC01548A6NM66 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC01548A6NM66 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LINC01548A6NM66 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.74■■□□□ 1.07
LINC01548A6NM66 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC01548A6NM66 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC01548A6NM66 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.73■■□□□ 1.07
LINC01548A6NM66 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC01548A6NM66 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LINC01548A6NM66 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC01548A6NM66 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.72■■□□□ 1.07
LINC01548A6NM66 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC21.71■■□□□ 1.07
LINC01548A6NM66 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LINC01548A6NM66 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.7■■□□□ 1.06
LINC01548A6NM66 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC01548A6NM66 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.68■■□□□ 1.06
LINC01548A6NM66 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.67■■□□□ 1.06
LINC01548A6NM66 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC01548A6NM66 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.66■■□□□ 1.06
LINC01548A6NM66 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LINC01548A6NM66 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.66■■□□□ 1.06
LINC01548A6NM66 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
LINC01548A6NM66 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
LINC01548A6NM66 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LINC01548A6NM66 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINC01548A6NM66 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC01548A6NM66 CAHM-201ENST00000604200 896 ntBASIC21.63■■□□□ 1.05
LINC01548A6NM66 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC01548A6NM66 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LINC01548A6NM66 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC01548A6NM66 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LINC01548A6NM66 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
LINC01548A6NM66 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
LINC01548A6NM66 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.58■■□□□ 1.04
LINC01548A6NM66 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LINC01548A6NM66 AC120057.4-201ENST00000624722 1615 ntBASIC21.57■■□□□ 1.04
LINC01548A6NM66 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.57■■□□□ 1.04
LINC01548A6NM66 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINC01548A6NM66 SUZ12P1-203ENST00000578195 985 ntBASIC21.55■■□□□ 1.04
LINC01548A6NM66 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
LINC01548A6NM66 AL391121.1-201ENST00000607967 1349 ntBASIC21.55■■□□□ 1.04
LINC01548A6NM66 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINC01548A6NM66 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LINC01548A6NM66 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC01548A6NM66 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC01548A6NM66 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINC01548A6NM66 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.51■■□□□ 1.03
LINC01548A6NM66 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC01548A6NM66 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC01548A6NM66 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms